WormBase Tree Display for CDS: Bm1731
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| Bm1731 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (14) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A0H5SHL3 | ||
| UniProt | UniProtAcc | A0A0H5SHL3 | ||||
| AlphaFold | entry | A0A0H5SHL3 | ||||
| Protein_id | Bm_v4_ChrX_scaffold_001 | CRZ23339 | 1 | |||
| DB_remark | BMA-UNC-5 protein; contains similarity to Pfam domains PF00090 (Thrombospondin type 1 domain), PF00531 (Death domain), PF00791 (ZU5 domain), PF13927 (Immunoglobulin domain), PF17217 (UPA domain); contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR000884 (Thrombospondin type-1 (TSP1) repeat), IPR036383 (Thrombospondin type-1 (TSP1) repeat superfamily), IPR033772 (UPA domain), IPR003599 (Immunoglobulin subtype), IPR011029 (Death-like domain superfamily), IPR000906 (ZU5 domain), IPR000488 (Death domain), IPR037936 (Netrin receptor UNC5), IPR013783 (Immunoglobulin-like fold), IPR036179 (Immunoglobulin-like domain superfamily) | |||||
| Origin | From_laboratory | ELG | ||||
| Species | Brugia malayi | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | RATT | |||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00221992 | ||||
| Corresponding_transcript | Bm1731.1 | |||||
| Corresponding_protein | BM44051 | |||||
| Matching_cDNA | IsoSeq_brugia_PB_6244_10 | Inferred_automatically | transcript_builder.pl | |||
| AA123539 | Inferred_automatically | transcript_builder.pl | ||||
| IsoSeq_brugia_PB_6244_5 | Inferred_automatically | transcript_builder.pl | ||||
| Brief_identification | Immunoglobulin I-set domain containing protein | Accession_evidence | TIGR | Bm1_31555 | ||
| RNASeq_FPKM (10) | ||||||
| Remark | [131112 pad] Renamed from Bm1731d as this is a single Isoform locus. | Curator_confirmed | WBPerson1983 | |||
| Method | curated |
