WormBase Tree Display for CDS: Bm3213a
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Bm3213a | Evidence | Curator_confirmed | WBPerson4055 | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | ||
Structure | Source_exons (12) | ||||
DB_info | DB_remark | contains similarity to Pfam domains PF00412 (LIM domain), PF02209 (Villin headpiece domain); contains similarity to Interpro domains IPR003128 (Villin headpiece), IPR001781 (Zinc finger, LIM-type), IPR036886 (Villin headpiece domain superfamily) | |||
Origin | From_laboratory | HX | |||
Species | Brugia malayi | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | RATT | ||||
Prediction_status | Confirmed | ||||
Isoform | Inferred_automatically | xace | |||
Visible | Gene | WBGene00223474 | |||
Corresponding_transcript | Bm3213a.1 | ||||
Corresponding_protein | BM46725 | ||||
Matching_cDNA | IsoSeq_brugia_PB_6033_1 | Inferred_automatically | transcript_builder.pl | ||
IsoSeq_brugia_PB_6033_2 | Inferred_automatically | transcript_builder.pl | |||
IsoSeq_brugia_PB_6033_3 | Inferred_automatically | transcript_builder.pl | |||
RNASeq_FPKM (10) | |||||
Last_reviewed | 28 Jun 2018 14:21:33 | WBPerson4055 | |||
Remark | [180628 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | ||
From_analysis | RNASeq | ||||
Method | curated |