WormBase Tree Display for Sequence: C04F5
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| C04F5 | DNA | C04F5 | 40766 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (11) | ||||
| CDS_child (124) | ||||||
| Transcript (12) | ||||||
| Nongenomic | yk262d7 | 32513 | 37475 | |||
| PCR_product (35) | ||||||
| Allele (815) | ||||||
| Oligo_set | Aff_C04F5.1 | 36029 | 37222 | |||
| Aff_C04F5.2 | 5657 | 4336 | ||||
| Aff_C04F5.3 | 9293 | 7985 | ||||
| Aff_C04F5.4 | 11895 | 10719 | ||||
| Aff_C04F5.5 | 14621 | 13663 | ||||
| Aff_C04F5.6 | 17827 | 16426 | ||||
| Aff_C04F5.7 | 19471 | 18816 | ||||
| Aff_C04F5.8 | 23777 | 22210 | ||||
| Aff_C04F5.9 | 26608 | 25408 | ||||
| Feature_object (180) | ||||||
| Feature_data | C04F5:Polysome | 1 | 40766 | |||
| C04F5:TranscriptionallyActiveRegion | 1 | 40766 | ||||
| C04F5:ChIPSeqTF | 1 | 40766 | ||||
| C04F5:TRF | 1 | 40766 | ||||
| C04F5:Dust | 1 | 40766 | ||||
| C04F5:inverted | 1 | 40766 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | F14F9 | 37857 | ||||
| Overlap_left | Y58A7A | |||||
| Clone_left_end | C04F5 | 1 | ||||
| Clone_right_end | C04F5 | 39270 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080342 | ||
| NDB_ID | _AF101305 | |||||
| NDB_SV | FO080342.2 | |||||
| Secondary_accession | AF101305 | |||||
| DB_remark | The 5' clone is Y58A7A, 200 bp overlap; the 3' clone is F14F9, 2910 bp overlap. Actual start of this clone is at base position 1 of C04F5; actual end is at 39270 of C04F5. | |||||
| [121025] Sequence correction: SNP 0 bases @ 35350 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Latreille P | ||||
| Bradshaw H | ||||||
| Elliott G | ||||||
| From_laboratory | RW | |||||
| Date | 14 Mar 1998 00:00:00 | |||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C04F5 | ||||
| Remark | added 1014 bp to the sequence after position 33725; there was a deletion in the original submission per Pat Minx 020125 db | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 00ec5a8ed561d9a395bc4cc1d21e494f | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 14 Mar 1998 00:00:00 | |||||
| Map | Sequence-V | |||||
| Interpolated_map_position | V | -2.49933 | ||||
| Method | Genomic_canonical |
