WormBase Tree Display for Sequence: C09G5

C09G5 DNA: C09G5 29688
  SMap: S_child: Gene_child (12)
      CDS_child: C09G5.1 824 8053
        C09G5.1:wp127 5695 8053
        C09G5.2a 19959 8313
        C09G5.2b 9037 8313
        C09G5.3 9282 10188
        C09G5.4 10586 11624
        C09G5.5 12886 13886
        C09G5.6 14678 17711
        C09G5.6:wp111 14678 17711
        C09G5.7 20577 22001
        C09G5.9:wp127 824 1189
        C09G5.13 23260 25243
        C09G5.14 28833 28453
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g152_x22_II_p 26194 26614
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g154_x22_II_p 7140 7451
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g162_x22_II_p 21135 21321
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g75n11_x22_II_m 9037 8981
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g144_x22_II_p 20577 20737
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g125_x22_II_p 14895 17180
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g31_x22_II_p 12992 13992
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g41n11_x22_II_m 19959 8316
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g150_x22_II_p 21748 21837
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g124_x22_II_p 9393 9513
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g160_x22_II_p 20990 21091
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g99_x22_II_p 10586 11621
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g149_x22_II_p 10821 11420
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g97n11_x22_II_m 9037 8981
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g32n11_x22_II_m 19959 8316
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g142_x22_II_p 26723 26993
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g168_x22_II_p 24500 24559
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g140_x22_II_p 23380 24133
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g124_x22_II_p 3122 7564
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g157_x22_II_p 20585 20635
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g130_x22_II_p 10586 11621
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g144_x22_II_p 12886 13883
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g170_x22_II_p 24082 24159
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g165_x22_II_p 27492 27545
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g48n11_x22_II_m 19959 8316
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g113_x22_II_p 824 7966
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g60n11_x22_II_m 9037 8328
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g86_x22_II_p 6079 6226
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g90_x22_II_p 10586 10907
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g201_x22_II_p 6265 6479
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g141_x22_II_p 6759 7099
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g63_x22_II_m 18737 8325
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g105_x22_II_p 7502 7921
        RNASEQ_embryo_him-8_20dC_post-L1_g59n11_x22_II_m 19959 8316
        RNASEQ_embryo_him-8_20dC_post-L1_g132_x22_II_p 10586 10922
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g142_x22_II_p 9393 9531
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g88_x22_II_p 20577 21998
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g8_x22_II_p 12992 13977
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g146_x22_II_p 6205 6497
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g158_x22_II_p 17529 17708
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g123_x22_II_p 14895 15629
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g150_x22_II_p 24134 24755
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g61_x22_II_p 10586 11621
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g159_x22_II_m 8644 8540
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g148_x22_II_p 24777 24954
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g166_x22_II_p 7055 7426
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g141_x22_II_p 14741 14876
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g124_x22_II_m 18737 17945
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g140_x22_II_p 17233 17386
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g130n11_x22_II_m 9037 8804
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g133_x22_II_m 8923 8801
        RNASEQ_L4_soma_JK1107_no_DNaseI_g22_x22_II_p 12992 13950
        RNASEQ_L4_soma_JK1107_no_DNaseI_g23n11_x22_II_p 14678 17708
        RNASEQ_L4_soma_JK1107_no_DNaseI_g161_x22_II_p 7145 7486
        RNASEQ_L4_soma_JK1107_no_DNaseI_g60n11_x22_II_m 19959 19626
        RNASEQ_L4_soma_JK1107_no_DNaseI_g206_x22_II_p 3122 6002
        RNASEQ_L4_soma_JK1107_no_DNaseI_g93e4k341_x22_II_m 17983 17765
        RNASEQ_L4_soma_JK1107_no_DNaseI_g247_x22_II_p 6265 6491
        RNASEQ_L4_soma_JK1107_no_DNaseI_g20_x22_II_p 10586 11621
        RNASEQ_L4_soma_JK1107_no_DNaseI_g10_x22_II_p 9282 10185
        RNASEQ_L4_soma_JK1107_no_DNaseI_g109_x22_II_m 9007 8427
        RNASEQ_L4_soma_JK1107_no_DNaseI_g93_x22_II_m 18737 9014
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g39_x22_II_p 10586 11621
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g174_x22_II_p 26639 26737
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g157_x22_II_p 25893 25943
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g58n11_x22_II_m 19959 8316
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g120_x22_II_p 25061 25240
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g147_x22_II_p 28030 29490
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g65_x22_II_p 12992 13953
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g106_x22_II_p 23260 24830
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g143_x22_II_p 26870 27092
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g114_x22_II_p 824 8050
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g67n11_x22_II_p 20577 21998
        RNASEQ_early_embryo_g117_x22_II_p 21767 21835
        RNASEQ_early_embryo_g102_x22_II_p 21444 21617
        RNASEQ_early_embryo_g108_x22_II_p 25896 25943
        RNASEQ_early_embryo_g121_x22_II_p 24158 24569
        RNASEQ_early_embryo_g112_x22_II_p 25061 25114
        RNASEQ_early_embryo_g122_x22_II_p 24056 24103
        RNASEQ_early_embryo_g70n11_x22_II_m 19959 8316
        RNASEQ_early_embryo_g114_x22_II_p 6037 6102
        RNASEQ_early_embryo_g154_x22_II_p 3162 5940
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g125_x22_II_p 6498 7165
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g64n11_x22_II_m 19959 8316
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g123_x22_II_p 24777 24885
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g134_x22_II_p 13081 13965
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g77_x22_II_p 10586 11621
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g136_x22_II_p 24056 24103
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g132_x22_II_p 25061 25216
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g126_x22_II_p 5913 6101
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g122_x22_II_p 25890 26155
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g100_x22t1_II_p 10586 11621
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g95_x22_II_p 824 8050
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g55_x22_II_m 18737 8316
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g118_x22_II_p 23260 24954
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g75n11_x22_II_m 9037 8981
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g103_x22_II_p 12992 13953
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g109_x22_II_p 26639 27918
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g127_x22_II_p 824 3160
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g133_x22_II_p 6498 7123
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g98_x22_II_p 12992 13224
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g124_x22_II_p 23260 24915
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g9_x22_II_p 10586 11621
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g106_x22_II_p 9393 9798
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g114s1k50_x22_II_p 24056 24912
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g54n11_x22_II_m 19959 8316
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g120_x22_II_p 6205 6279
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g115_x22_II_p 7145 8050
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g140_x22_II_p 6205 6264
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g72et4k327_x22_II_m 18737 17819
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g33n11_x22t1_II_p 16173 17309
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g74_x22_II_m 17983 8316
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g7_x22t1_II_p 10586 11621
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g97_x22_II_p 9282 10185
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g138_x22_II_p 7055 7420
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g21_x22_II_p 12992 13956
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g24_x22t1_II_p 14895 17708
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g169_x22_II_p 24101 24157
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g35_x22_II_p 9282 10185
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g65et5k308_x22_II_m 17983 17822
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g65_x22_II_m 18737 8316
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g34_x22_II_p 12992 13953
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g175_x22_II_p 7544 7942
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g19_x22_II_p 10586 10922
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g10n11_x22_II_p 14678 17708
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g114_x22_II_p 20990 21998
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g28_x22_II_p 12992 13977
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g94n11_x22_II_m 9037 8981
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g38n11_x22_II_m 19959 8316
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g170_x22_II_p 21116 21386
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g35n11_x22_II_m 19959 8316
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g52_x22_II_p 12992 13950
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g209_x22_II_p 27180 27236
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g62_x22_II_p 10586 11621
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g30n11_x22_II_m 19959 8616
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g159_x22_II_p 9393 9597
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g9_x22_II_p 12886 13196
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g188_x22_II_p 21885 21998
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g74n11_x22_II_m 9037 8981
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g181_x22_II_p 21135 21285
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g101n11_x22_II_p 20577 20974
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g134_x22_II_p 866 3109
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g150_x22_II_p 6759 7036
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g160_x22_II_p 983 3118
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g121n11_x22_II_p 20577 20956
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g97_x22_II_p 10586 11621
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g72_x22_II_p 12886 13193
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g36n11_x22_II_m 19959 8316
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g204_x22_II_p 21836 21936
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g89n11_x22_II_m 9037 8981
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g162_x22_II_p 21083 21614
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g170_x22_II_p 20726 20884
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g16_x22t1_II_p 10586 11621
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g108_x22_II_p 16914 17708
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g95_x22_II_p 14678 15200
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g137_x22_II_p 21793 21950
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g127_x22_II_p 9282 9609
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g2_x22_II_p 12992 13974
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g107n11_x22_II_p 20554 20634
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g34n11_x22_II_m 19959 8316
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g134_x22_II_p 21528 21789
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g70n11_x22_II_m 9037 8981
        C09G5.gc1 2105 8053
        C09G5.gc2 9175 8313
        C09G5.gc3 9282 10188
        C09G5.gc4 10586 11624
        C09G5.gc5 12886 13886
        C09G5.gc6 14678 17711
        C09G5.gc7 19959 18408
        C09G5.gc8 20577 22001
        C09G5.gc9 24056 28125
        C09G5.gc10 28833 28453
        ContigII.elegans.jigsaw.2720.mRNA2720 9205 8189
        ContigII.elegans.jigsaw.2725.mRNA2725 20105 17817
        ContigII.elegans.jigsaw.2721.mRNA2721 9264 10290
        ContigII.elegans.jigsaw.2722.mRNA2722 10446 11777
        ContigII.elegans.jigsaw.2723.mRNA2723 12867 13952
        ContigII.elegans.jigsaw.2726.mRNA2726 20526 22120
        ContigII.elegans.jigsaw.2724.mRNA2724 14596 17815
        ContigII.elegans.jigsaw.2719.mRNA2719 766 8219
        AG1201_C09G5.1.T2 824 8040
        AG1201_C09G5.1.T1 824 8053
        AG1201_C09G5.2.T4 9037 8313
        AG1201_C09G5.2.T3 19959 8313
        AG1201_C09G5.3.T1 9282 10188
        AG1201_C09G5.5.T5 10586 11624
        AG1201_C09G5.5.T7 10674 13953
        AG1201_RIT2M.1269.T1 11033 10722
        AG1201_C09G5.5.T3 10821 11624
        AG1201_RIT2P.1373.T1 12886 13953
        AG1201_C09G5.5.T1 12992 13953
        AG1201_C09G5.5.T2 12992 14064
        AG1201_RIT2M.1330.T1 13109 13059
        AG1201_C09G5.6.T1 14678 17711
        AG1201_C09G5.6.T2 14678 17711
        AG1201_C09G5.2.T2 19959 17762
        AG1201_C09G5.2.T1 19959 17819
        AG1201_C09G5.7.T1 20577 22001
        AG1201_C09G5.8.T4 23260 25243
        AG1201_C09G5.8.T3 24777 25243
        AG1201_C09G5.8.T7 25943 28122
        AG1201_RIT2P.2027.T1 28503 28700
      Transcript (13)
      Nongenomic: yk244c3 15508 17754
      PCR_product (32)
      Allele (426)
      Oligo_set: Aff_C09G5.1 6687 8053
        Aff_C09G5.2 9127 8313
        Aff_C09G5.3 9589 10188
        Aff_C09G5.4 11025 11624
        Aff_C09G5.5 13287 13886
        Aff_C09G5.6 17016 17711
        Aff_C09G5.7 21309 22001
      Feature_object (168)
      Feature_data: C09G5:Polysome 1 29688
        C09G5:TranscriptionallyActiveRegion 1 29688
        C09G5:ChIPSeqTF 1 29688
        C09G5:TRF 1 29688
        C09G5:Dust 1 29688
        C09G5:inverted 1 29688
      Homol_data (18)
  Structure: From: Source: CHROMOSOME_II
    Overlap_right: C52A11 29581
    Overlap_left: D2089
    Clone_left_end: C09G5 1
      C52A11 29581
    Clone_right_end: D2089 4582
  DB_info: Database: EMBL NDB_AC Z46791
        NDB_SV Z46791.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Palmer S
    From_laboratory: HX
    Date_directory: 940822
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: C09G5
    Reference: WBPaper00015325
      WBPaper00015370
      WBPaper00022214
  Properties: Genomic_canonical
    Checksum: MD5: 005bfdef0c77de2e5f3c3eb0246972b9
    Status: Finished: 22 Aug 1994 00:00:00
      Submitted: 25 Nov 1994 00:00:00
      Annotated: 23 Nov 1994 00:00:00
  Map: Sequence-II Ends: Left: 6346
        Right: 6368
  Interpolated_map_position: II 3.1241
  Assembly_tags: annotation 0 15 beginning of C09G5
      4568 4582 D2089
          D2089 end
      29585 29594 start of overlap with C52A11
  Method: Genomic_canonical