Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: C48B6.6a

expand all nodes | collapse all nodes | view schema

Name Class

C48B6.6aEvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceC48B6
StructureSource_exons145
93179
234379
426702
7461012
12981522
19132025
21052214
22622392
24622592
26372792
28512994
34833635
43314465
45114713
47885011
50535160
52425471
55225609
56575766
58395964
61716436
65326816
68637008
71127407
74537597
76517771
83208498
85458829
88749044
92879370
94169564
96659902
998910093
1014210438
1054310895
1097311060
1113611296
1141711497
1157111668
1171311846
1192612003
DB_infoDatabaseKEGGKEGG_id2.7.11.1
SwissProtUniProtAccO01510
UniProtIsoformAccO01510-1
UniProtUniProtAccO01510
UniProt_GCRPUniProtAccO01510
AlphaFoldentryO01510
NCBI_proteinGI_numberGI:373219374
TREEFAMTREEFAM_IDTF352560
Protein_idCHROMOSOME_ICCD675831
DB_remarkSMG-1 protein; contains similarity to Pfam domains PF00454 (Phosphatidylinositol 3- and 4-kinase), PF02260 (FATC domain), PF15785 (Serine/threonine-protein kinase smg-1); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000403 (Phosphatidylinositol 3-/4-kinase, catalytic domain), IPR031559 (Serine/threonine-protein kinase SMG1), IPR016024 (Armadillo-type fold), IPR036940 (Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily), IPR003152 (FATC domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformAccession_evidenceEMBLAF149821
Visible (12)
Associated_featureWBsf027457
Methodcurated