WormBase Tree Display for Sequence: C52E12
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C52E12 | DNA | C52E12 | 40420 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (14) | ||||
CDS_child (356) | ||||||
Transcript | C52E12.7 | 37215 | 37118 | |||
C52E12.7a | 37197 | 37174 | ||||
C52E12.7b | 37155 | 37133 | ||||
C52E12.8 | 10293 | 10198 | ||||
C52E12.9 | 37247 | 37373 | ||||
C52E12.10 | 930 | 1300 | ||||
C52E12.12 | 29479 | 28544 | ||||
C52E12.t2 | 10211 | 10282 | ||||
C52E12.t3 | 10002 | 9931 | ||||
C52E12.1a.1 | 32740 | 37090 | ||||
C52E12.1b.1 | 32740 | 37094 | ||||
C52E12.2a.1 | 1989 | 17562 | ||||
C52E12.2a.2 | 2870 | 17563 | ||||
C52E12.2b.1 | 1925 | 17562 | ||||
C52E12.3.1 | 19628 | 17749 | ||||
C52E12.3.2 | 19630 | 17736 | ||||
C52E12.4.1 | 29447 | 19718 | ||||
C52E12.6.1 | 29851 | 31878 | ||||
Pseudogene | C52E12.11 | 4829 | 4385 | |||
C52E12.t1 | 8565 | 8636 | ||||
C52E12.t4:wp170 | 8565 | 8636 | ||||
PCR_product (20) | ||||||
Allele (545) | ||||||
Oligo_set | Aff_C52E12.1 | 35887 | 36822 | |||
Aff_C52E12.2 | 16189 | 17147 | ||||
Aff_C52E12.3 | 19047 | 18015 | ||||
Aff_C52E12.4 | 21962 | 20151 | ||||
Aff_C52E12.5 | 28066 | 27426 | ||||
Feature_object (375) | ||||||
Feature_data | C52E12:Polysome | 1 | 40420 | |||
C52E12:TranscriptionallyActiveRegion | 1 | 40420 | ||||
C52E12:ChIPSeqTF | 1 | 40420 | ||||
C52E12:TRF | 1 | 40420 | ||||
C52E12:Dust | 1 | 40420 | ||||
C52E12:inverted | 1 | 40420 | ||||
Homol_data (20) | ||||||
Structure | From | Source | CHROMOSOME_II | |||
Overlap_right | ZK1131 | 40221 | ||||
Overlap_left | C15F1 | |||||
Clone_left_end | C52E12 | 1 | ||||
Clone_right_end | C15F1 | 9855 | ||||
C52E12 | 40420 | |||||
DB_info | Database | EMBL | NDB_AC | FO080554 | ||
NDB_ID | _U50135 | |||||
NDB_SV | FO080554.2 | |||||
Secondary_accession | U50135 | |||||
DB_remark | The 5' clone is C15F1, 200 bp overlap; the 3' clone is ZK1131, 200 bp overlap. Actual start of this clone is at base position 1 of C52E12; actual end is at 40420 of C52E12. | |||||
[121025] Sequence correction: SNP 0 bases @ 6733 | ||||||
[121025] Sequence correction: SNP 0 bases @ 10346 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Du Z | ||||
Wilson RK | ||||||
From_laboratory | RW | |||||
Date | 20 Feb 1996 00:00:00 | |||||
04 Sep 1995 00:00:00 | ||||||
Date_directory | 960219 | |||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | C52E12 | ||||
Reference | WBPaper00011007 | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | dd10504e0fef01e11cea452e83f8cb23 | ||||
Status | Finished | |||||
Submitted | 20 Feb 1996 00:00:00 | |||||
Map | Sequence-II | |||||
Interpolated_map_position | II | 0.279691 | ||||
Method | Genomic_canonical |