WormBase Tree Display for CDS: CBG01980c
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CBG01980c | SMap | S_parent | Sequence | cb25.fpc0045 | |
---|---|---|---|---|---|
Structure | Source_exons (11) | ||||
DB_info | DB_remark | CBR-UNC-58 protein; contains similarity to Pfam domain PF07885 (Ion channel); contains similarity to Interpro domains IPR003280 (Two pore domain potassium channel), IPR013099 (Potassium channel domain) | |||
Origin | From_laboratory | CB | |||
Species | Caenorhabditis briggsae | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Curator_confirmed | WBPerson4025 | |||
Visible | Gene | WBGene00025136 | |||
Corresponding_transcript | CBG01980c.1 | ||||
Corresponding_protein | CBP38688 | ||||
Corresponding_oligo_set | GPL8303_CB6_WBGene00025136_A | ||||
GPL8303_CB6_WBGene00025137_B | |||||
GPL14143_CBG01980_999-1058_0.770_25_C | |||||
GPL14143_CBG01980_1229-1288_0.584_135_B | |||||
GPL14143_CBG01980_1331-1390_0.773_23_A | |||||
Matching_cDNA | briggsae_GG844|c12_g2_i3 | Inferred_automatically | transcript_builder.pl | ||
Microarray_results | GPL8303_CB6_WBGene00025136_A | ||||
GPL8303_CB6_WBGene00025137_B | |||||
GPL14143_CBG01980_999-1058_0.770_25_C | |||||
GPL14143_CBG01980_1229-1288_0.584_135_B | |||||
GPL14143_CBG01980_1331-1390_0.773_23_A | |||||
RNASeq_FPKM (9) | |||||
Last_reviewed | 31 Aug 2016 10:21:27 | WBPerson4025 | |||
Remark | [160826 gw3] The set of genes: WBGene00025138 WBGene00025136 WBGene00025137 WBGene00088899 has been merged and this structure is based on the Trinity model 'briggsae_GG844|c12_g2_i3-chrX-1'. | Curator_confirmed | WBPerson4025 | ||
Method | curated |