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WormBase Tree Display for CDS: CBG01980c

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Name Class

CBG01980cSMapS_parentSequencecb25.fpc0045
StructureSource_exons (11)
DB_infoDB_remarkCBR-UNC-58 protein; contains similarity to Pfam domain PF07885 (Ion channel); contains similarity to Interpro domains IPR003280 (Two pore domain potassium channel), IPR013099 (Potassium channel domain)
OriginFrom_laboratoryCB
SpeciesCaenorhabditis briggsae
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformCurator_confirmedWBPerson4025
VisibleGeneWBGene00025136
Corresponding_transcriptCBG01980c.1
Corresponding_proteinCBP38688
Corresponding_oligo_setGPL8303_CB6_WBGene00025136_A
GPL8303_CB6_WBGene00025137_B
GPL14143_CBG01980_999-1058_0.770_25_C
GPL14143_CBG01980_1229-1288_0.584_135_B
GPL14143_CBG01980_1331-1390_0.773_23_A
Matching_cDNAbriggsae_GG844|c12_g2_i3Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL8303_CB6_WBGene00025136_A
GPL8303_CB6_WBGene00025137_B
GPL14143_CBG01980_999-1058_0.770_25_C
GPL14143_CBG01980_1229-1288_0.584_135_B
GPL14143_CBG01980_1331-1390_0.773_23_A
RNASeq_FPKM (9)
Last_reviewed31 Aug 2016 10:21:27WBPerson4025
Remark[160826 gw3] The set of genes: WBGene00025138 WBGene00025136 WBGene00025137 WBGene00088899 has been merged and this structure is based on the Trinity model 'briggsae_GG844|c12_g2_i3-chrX-1'.Curator_confirmedWBPerson4025
Methodcurated