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WormBase Tree Display for CDS: CBG04550a

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Name Class

CBG04550aSMapS_parentSequencecb25.fpc0090
StructureSource_exons1180
370423
712882
10261123
11701309
13601441
14901630
16742163
22202462
DB_infoDatabaseUniProtUniProtAccA8WXW5
UniProtIdA8WXW5_CAEBR
DB_remarkCBR-UNC-61 protein; contains similarity to Pfam domain PF00735 (Septin); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR030379 (Septin-type guanine nucleotide-binding (G) domain)
OriginFrom_laboratoryCB
SpeciesCaenorhabditis briggsae
PropertiesCodingCDS
Prediction_statusPartially_confirmed
IsoformCurator_confirmedWBPerson4025
VisibleGeneWBGene00027195
Corresponding_transcriptCBG04550a.1
Corresponding_proteinCBP31069
Corresponding_oligo_setGPL8303_CB6_WBGene00027195_A
GPL8303_CB6_WBGene00027195_B
GPL14143_CBG04550_933-992_0.907_36_C
GPL14143_CBG04550_1139-1198_0.929_20_A
GPL14143_CBG04550_1250-1309_0.949_8_B
Microarray_resultsGPL8303_CB6_WBGene00027195_A
GPL8303_CB6_WBGene00027195_B
GPL14143_CBG04550_933-992_0.907_36_C
GPL14143_CBG04550_1139-1198_0.929_20_A
GPL14143_CBG04550_1250-1309_0.949_8_B
RNASeq_FPKM (9)
Last_reviewed31 Aug 2016 10:21:23WBPerson4025
Remark[gffnote] orthologous to Y50E8A.4 by best mutual match (eval=0) ; Ortholog Y50E8A.4 ; Supported_by_ortholog ; Supported_by_paralogs ; Supported_by_multiple_predictions ; Brigpep BP:CBP01249 ; Gene WBGene00027195
[20080722 tb] Modified based on Jigsaw gene ContigchrV.briggsae.jigsaw.3055
[160826 gw3] The structure of this CDS has been confirmed by the Trinity model 'briggsae_GG3279|c11_g1_i1-chrV-1b'.Curator_confirmedWBPerson4025
Methodcurated