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WormBase Tree Display for CDS: CBG05805

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Name Class

CBG05805SMapS_parentSequencecb25.fpc0143a
StructureSource_exons (17)
DB_infoDatabaseUniProtUniProtAccA8X1K9
UniProtIdA8X1K9_CAEBR
TrEMBLUniProtAccA8X1K9
UniProt_GCRPUniProtAccA8X1K9
Protein_idcb25.fpc0143aCAP265192
DB_remarkCBR-UNC-8 protein; contains similarity to Pfam domain PF00858 (Amiloride-sensitive sodium channel); contains similarity to Interpro domains IPR001873 (Epithelial sodium channel), IPR004726 (Degenerin)
OriginFrom_laboratoryCB
SpeciesCaenorhabditis briggsae
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Artificial_intronLow_quality_sequence
VisibleGeneWBGene00028189
Corresponding_transcriptCBG05805.1
Corresponding_proteinCBP40030
Corresponding_oligo_setGPL8303_CB6_WBGene00028189_A
GPL8303_CB6_WBGene00028189_B
GPL14143_CBG05805_2241-2300_0.915_7_A
Microarray_resultsGPL8303_CB6_WBGene00028189_A
GPL8303_CB6_WBGene00028189_B
GPL14143_CBG05805_2241-2300_0.915_7_A
RNASeq_FPKM (9)
Last_reviewed31 Aug 2016 10:21:20WBPerson4025
Remark[gffnote] orthologous to R13A1.4 by best mutual match (eval=0) ; Ortholog R13A1.4 ; Supported_by_ortholog ; Supported_by_paralogs ; Supported_by_multiple_predictions ; Brigpep BP:CBP01560 ; Gene WBGene00028189
[20080722 tb] Modified based on Jigsaw gene ContigchrIV.briggsae.jigsaw.1192
[160826 gw3] This CDS has been updated by using the Trinity model 'briggsae_GG6939|c6_g1_i1-chrIV-1'.Curator_confirmedWBPerson4025
Methodcurated