WormBase Tree Display for CDS: CBG05805
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CBG05805 | SMap | S_parent | Sequence | cb25.fpc0143a | |
---|---|---|---|---|---|
Structure | Source_exons (17) | ||||
DB_info | Database | UniProt | UniProtAcc | A8X1K9 | |
UniProtId | A8X1K9_CAEBR | ||||
TrEMBL | UniProtAcc | A8X1K9 | |||
UniProt_GCRP | UniProtAcc | A8X1K9 | |||
Protein_id | cb25.fpc0143a | CAP26519 | 2 | ||
DB_remark | CBR-UNC-8 protein; contains similarity to Pfam domain PF00858 (Amiloride-sensitive sodium channel); contains similarity to Interpro domains IPR001873 (Epithelial sodium channel), IPR004726 (Degenerin) | ||||
Origin | From_laboratory | CB | |||
Species | Caenorhabditis briggsae | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Artificial_intron | Low_quality_sequence | ||||
Visible | Gene | WBGene00028189 | |||
Corresponding_transcript | CBG05805.1 | ||||
Corresponding_protein | CBP40030 | ||||
Corresponding_oligo_set | GPL8303_CB6_WBGene00028189_A | ||||
GPL8303_CB6_WBGene00028189_B | |||||
GPL14143_CBG05805_2241-2300_0.915_7_A | |||||
Microarray_results | GPL8303_CB6_WBGene00028189_A | ||||
GPL8303_CB6_WBGene00028189_B | |||||
GPL14143_CBG05805_2241-2300_0.915_7_A | |||||
RNASeq_FPKM (9) | |||||
Last_reviewed | 31 Aug 2016 10:21:20 | WBPerson4025 | |||
Remark | [gffnote] orthologous to R13A1.4 by best mutual match (eval=0) ; Ortholog R13A1.4 ; Supported_by_ortholog ; Supported_by_paralogs ; Supported_by_multiple_predictions ; Brigpep BP:CBP01560 ; Gene WBGene00028189 | ||||
[20080722 tb] Modified based on Jigsaw gene ContigchrIV.briggsae.jigsaw.1192 | |||||
[160826 gw3] This CDS has been updated by using the Trinity model 'briggsae_GG6939|c6_g1_i1-chrIV-1'. | Curator_confirmed | WBPerson4025 | |||
Method | curated |