WormBase Tree Display for CDS: CBG08066c
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CBG08066c | SMap | S_parent | Sequence | cb25.fpc1402c | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 153 | ||
202 | 326 | ||||
379 | 554 | ||||
608 | 705 | ||||
928 | 1142 | ||||
1218 | 1293 | ||||
DB_info | DB_remark | CBR-UNC-1 protein; contains similarity to Pfam domain PF01145 (SPFH domain / Band 7 family); contains similarity to Interpro domains IPR036013 (Band 7/SPFH domain superfamily), IPR001107 (Band 7 domain), IPR001972 (Stomatin/HflK family), IPR028522 (), IPR043202 (Band-7 stomatin-like) | |||
Origin | From_laboratory | CB | |||
Species | Caenorhabditis briggsae | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Curator_confirmed | WBPerson4025 | |||
Visible | Gene | WBGene00029931 | |||
Corresponding_transcript | CBG08066c.1 | ||||
Corresponding_protein | CBP47130 | ||||
Corresponding_oligo_set | GPL8303_CB6_WBGene00029931_A | ||||
GPL14143_CBG08066_412-471_0.868_3_A | |||||
GPL14143_CBG08066_488-547_0.862_4_B | |||||
GPL14143_CBG08066_698-757_0.882_2_C | |||||
Matching_cDNA | briggsae_GG1312|c24_g4_i1 | Inferred_automatically | transcript_builder.pl | ||
Microarray_results | GPL8303_CB6_WBGene00029931_A | ||||
GPL14143_CBG08066_412-471_0.868_3_A | |||||
GPL14143_CBG08066_488-547_0.862_4_B | |||||
GPL14143_CBG08066_698-757_0.882_2_C | |||||
RNASeq_FPKM (9) | |||||
Last_reviewed | 31 Aug 2016 10:21:25 | WBPerson4025 | |||
Remark | [160826 gw3] This structure has been created based on the Trinity model 'briggsae_GG1312|c24_g4_i1-chrX-1'. | Curator_confirmed | WBPerson4025 | ||
Method | curated |