WormBase Tree Display for CDS: CBG14917b
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| CBG14917b | SMap | S_parent | Sequence | cb25.fpc3857b | |
|---|---|---|---|---|---|
| Structure | Source_exons (15) | ||||
| DB_info | DB_remark | CBR-UNC-40 protein; contains similarity to Pfam domains PF00041 (Fibronectin type III domain), PF07679 (Immunoglobulin I-set domain), PF13927 (Immunoglobulin domain); contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin type III), IPR013098 (Immunoglobulin I-set), IPR013783 (Immunoglobulin-like fold), IPR036179 (Immunoglobulin-like domain superfamily), IPR003599 (Immunoglobulin subtype), IPR036116 (Fibronectin type III superfamily) | |||
| Origin | From_laboratory | CB | |||
| Species | Caenorhabditis briggsae | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Curator_confirmed | WBPerson4025 | |||
| Visible | Gene | WBGene00035291 | |||
| Corresponding_transcript | CBG14917b.1 | ||||
| Corresponding_protein | CBP42473 | ||||
| Corresponding_oligo_set | GPL8303_CB6_WBGene00035291_A | ||||
| GPL8303_CB6_WBGene00035291_B | |||||
| GPL14143_CBG14917_1940-1999_0.789_110_B | |||||
| GPL14143_CBG14917_2902-2961_0.844_41_A | |||||
| GPL14143_CBG14917_3796-3855_0.598_535_C | |||||
| Microarray_results | GPL8303_CB6_WBGene00035291_A | ||||
| GPL8303_CB6_WBGene00035291_B | |||||
| GPL14143_CBG14917_1940-1999_0.789_110_B | |||||
| GPL14143_CBG14917_2902-2961_0.844_41_A | |||||
| GPL14143_CBG14917_3796-3855_0.598_535_C | |||||
| RNASeq_FPKM (9) | |||||
| Last_reviewed | 31 Aug 2016 10:21:14 | WBPerson4025 | |||
| Remark | [160826 gw3] This structure has been created based on the Trinity model 'briggsae_GG3893|c32_g1_i3-chrI-1b'. | Curator_confirmed | WBPerson4025 | ||
| Method | curated |
