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WormBase Tree Display for CDS: CBG15755

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Name Class

CBG15755SMapS_parentSequencecb25.fpc4030a2
StructureSource_exons161
592788
18982025
27953026
37334383
54655659
57785846
DB_infoDatabaseUniProtUniProtAccA8XMQ1
UniProtIdA8XMQ1_CAEBR
TrEMBLUniProtAccA8XMQ1
UniProt_GCRPUniProtAccA8XMQ1
TREEFAMTREEFAM_IDTF314688
Protein_idcb25.fpc4030a2CAP339271
DB_remarkCBR-UNC-25 protein; contains similarity to Pfam domain PF00282 (Pyridoxal-dependent decarboxylase conserved domain); contains similarity to Interpro domains IPR002129 (Pyridoxal phosphate-dependent decarboxylase), IPR015424 (Pyridoxal phosphate-dependent transferase), IPR015421 (Pyridoxal phosphate-dependent transferase, major domain)
OriginFrom_laboratoryCB
SpeciesCaenorhabditis briggsae
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00035897
Corresponding_transcriptCBG15755.1
Corresponding_proteinCBP03839
Corresponding_oligo_setGPL8303_CB6_WBGene00035897_A
GPL8303_CB6_WBGene00035897_B
GPL14143_CBG15755_1142-1201_0.942_1_A
Matching_cDNAbriggsae_GG4966|c1_g1_i1Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL8303_CB6_WBGene00035897_A
GPL8303_CB6_WBGene00035897_B
GPL14143_CBG15755_1142-1201_0.942_1_A
RNASeq_FPKM (9)
Last_reviewed28 Jun 2018 15:24:14WBPerson4025
Remark[gffnote] orthologous to Y37D8A.23 by best mutual match (eval=0) ; Ortholog Y37D8A.23 ; Supported_by_ortholog ; Supported_by_paralogs ; Supported_by_multiple_predictions ; Brigpep BP:CBP03839 ; Gene WBGene00035897
[20080722 tb] Modified based on Jigsaw gene ContigchrIII.briggsae.jigsaw.115
[180628 gw3] This CDS has been inspected and looks satisfactory.Curator_confirmedWBPerson4025
From_analysisRNASeq
Methodcurated