WormBase Tree Display for CDS: CBN05375

CBN05375 SMap: S_parent: Sequence: Cbre_Contig199
  Structure: Source_exons: 1 86
      872 947
      994 1112
      1461 1566
      2041 2217
      2346 2502
      3265 3367
      3416 3627
      3818 3912
  DB_info: Database: TREEFAM TREEFAM_ID TF313128
    DB_remark: CBN-UNC-76 protein; contains similarity to Pfam domain PF07763 (FEZ-like protein); contains similarity to Interpro domain IPR011680 (Fasciculation and elongation protein zeta, FEZ)
  Origin: From_laboratory: RW
    Species: Caenorhabditis brenneri
  Properties: Coding: CDS
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00144100
    Corresponding_transcript: CBN05375.1
    Corresponding_protein: CN27041
    Corresponding_oligo_set: GPL14142_CBN05375_1093-1152_0.937_6_B
      GPL14142_CBN05375_752-811_0.915_14_C
      GPL14142_CBN05375_931-990_0.955_1_A
    Matching_cDNA: FF081675 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14142_CBN05375_752-811_0.915_14_C
      GPL14142_CBN05375_931-990_0.955_1_A
      GPL14142_CBN05375_1093-1152_0.937_6_B
    RNASeq_FPKM: WBls:0000002 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        16.2768 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        27.6935 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        27.9357 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        29.9336 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        30.9504 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        33.7362 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        34.4858 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        34.8443 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        29.5233 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        46.6675 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        57.4165 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        59.7378 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        62.8588 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        72.1057 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 31.3277 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        33.3602 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (14)
    Remark: [20081101 mh] original nGASP gene : Contig488.brenneri.jigsaw.25.mRNA25
      [20081113 db] corrected translation frame of this protein
  Method: curated