WormBase Tree Display for CDS: CBN31903

CBN31903 SMap: S_parent: Sequence: Cbre_Contig3369
  Structure: Source_exons: 1 191
      236 284
      530 933
      981 1231
      1437 2221
  DB_info: Database: TREEFAM TREEFAM_ID TF354311
    DB_remark: CBN-UNC-26 protein; contains similarity to Pfam domains PF02383 (SacI homology domain), PF03372 (Endonuclease/Exonuclease/phosphatase family); contains similarity to Interpro domains IPR002013 (SAC domain), IPR000300 (Inositol polyphosphate-related phosphatase), IPR005135 (Endonuclease/exonuclease/phosphatase), IPR036691 (Endonuclease/exonuclease/phosphatase superfamily)
  Origin: From_laboratory: RW
    Species: Caenorhabditis brenneri
  Properties: Coding: CDS
      Prediction_status: Predicted
    Start_not_found: 1
  Visible: Gene: WBGene00193868
    Corresponding_transcript: CBN31903.1
    Corresponding_protein: CN35868
    Corresponding_oligo_set: GPL14142_CBN31903_1287-1346_0.913_13_C
      GPL14142_CBN31903_1485-1544_0.916_12_B
      GPL14142_CBN31903_1515-1574_0.941_1_A
    Microarray_results: GPL14142_CBN31903_1287-1346_0.913_13_C
      GPL14142_CBN31903_1485-1544_0.916_12_B
      GPL14142_CBN31903_1515-1574_0.941_1_A
    RNASeq_FPKM: WBls:0000002 0.418509 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        1.99875 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        3.85122 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        5.71221 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        6.24548 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        6.25655 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        6.29607 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        6.38674 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        13.9492 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        12.6369 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        12.9008 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        13.8167 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        16.2442 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        8.25695 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
      WBls:0000038 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        5.31957 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (15)
    Remark: [20090520 js] Original name Cbre_Contig3369.brenneri.jigsaw.1
  Method: curated