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WormBase Tree Display for CDS: CJA04929

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Name Class

CJA04929SMapS_parentSequenceCjap.Contig4283
StructureSource_exons1114
44425143
58205969
60196262
63166437
89739126
98829945
1089211063
DB_infoDB_remarkCJP-VGLU-2 protein; contains similarity to Pfam domain PF07690 (Major Facilitator Superfamily); contains similarity to Interpro domains IPR011701 (Major facilitator superfamily), IPR036259 (MFS transporter superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00124133
Corresponding_transcriptCJA04929.1
Corresponding_proteinJA64703
Corresponding_oligo_setGPL14145_CJA04929_1123-1182_0.887_15_B
GPL14145_CJA04929_1476-1535_0.879_19_A
Matching_cDNAFF114127Inferred_automaticallytranscript_builder.pl
japonica_GG607|c0_g1_i1Inferred_automaticallytranscript_builder.pl
japonica_GG607|c0_g2_i1Inferred_automaticallytranscript_builder.pl
japonica_GG4182|c5_g1_i1Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA04929_1123-1182_0.887_15_B
GPL14145_CJA04929_1476-1535_0.879_19_A
RNASeq_FPKMWBls:00000043.34053From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000271.15657From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000381.59879From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
2.02785From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.820972From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
21.3008From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
22.0615From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
23.1226From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
2.50216From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2.83533From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
3.25093From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
9.88599From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
Remarkbased on Augustus prediction Cjap.Contig4283.g3093.t1[100726 mh6]
Methodcurated