Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: CJA09755

expand all nodes | collapse all nodes | view schema

Name Class

CJA09755EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig6358
StructureSource_exons1340
16661762
22062684
27472987
46494768
48134954
DB_infoDatabaseTREEFAMTREEFAM_IDTF321411
DB_remarkCJP-UNC-34 protein; contains similarity to Pfam domains PF00568 (WH1 domain), PF08776 (VASP tetramerisation domain); contains similarity to Interpro domains IPR011993 (PH-like domain superfamily), IPR038023 (VASP tetramerisation domain superfamily), IPR014885 (VASP tetramerisation), IPR000697 (WH1/EVH1 domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00128959
Corresponding_transcriptCJA09755.1
Corresponding_proteinJA59069
Corresponding_oligo_setGPL14145_CJA09755_311-370_0.929_2_C
GPL14145_CJA09755_494-553_0.939_1_B
GPL14145_CJA09755_622-681_0.877_17_A
GPL14145_CJA22729_8-67_0.924_3_C
GPL14145_CJA22729_73-132_0.936_2_B
GPL14145_CJA22729_171-230_0.941_1_A
Matching_cDNAjaponica_GG4855|c0_g1_i1Inferred_automaticallytranscript_builder.pl
japonica_GG4855|c2_g1_i1Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA09755_311-370_0.929_2_C
GPL14145_CJA09755_494-553_0.939_1_B
GPL14145_CJA09755_622-681_0.877_17_A
GPL14145_CJA22729_171-230_0.941_1_A
GPL14145_CJA22729_73-132_0.936_2_B
GPL14145_CJA22729_8-67_0.924_3_C
RNASeq_FPKMWBls:000000470.3552From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002729.2927From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003824.6131From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
27.8483From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004112.4191From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
18.1185From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
18.2558From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
20.3963From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
31.9372From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
53.6797From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
57.2249From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
68.9296From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
Remarkbased on Augustus prediction Cjap.Contig6358.g4542.t1[100726 mh6]
Methodcurated