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WormBase Tree Display for CDS: CJA13291b

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Name Class

CJA13291bSMapS_parentSequenceCjap.Contig18252
StructureSource_exons1153
201377
542670
27822956
61767473
88719002
1024610465
1052110677
1094211458
DB_infoDB_remarkCJP-UNC-32 protein; contains similarity to Pfam domain PF01496 (V-type ATPase 116kDa subunit family); contains similarity to Interpro domain IPR002490 (V-type ATPase, V0 complex, 116kDa subunit family)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Isoform
VisibleGeneWBGene00132495
Corresponding_transcriptCJA13291b.1
Corresponding_proteinJA47862
Corresponding_oligo_setGPL14145_CJA13291_1015-1074_0.849_36_A
GPL14145_CJA22000_338-397_0.791_24_A
Microarray_resultsGPL14145_CJA13291_1015-1074_0.849_36_A
GPL14145_CJA22000_338-397_0.791_24_A
RNASeq_FPKMWBls:000000447.7765From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002742.7961From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003837.1247From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
37.594From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.00338From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
11.9317From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
12.4197From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
14.9863From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
1.50695From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
20.8134From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
28.8217From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
8.55932From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
Remarkbased on Augustus prediction Cjap.Contig18252.g29467.t1[100726 mh6]
Methodcurated