WormBase Tree Display for CDS: CJA14042
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| CJA14042 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Cjap.Contig16302 | ||
| Structure | Source_exons (11) | ||||
| DB_info | Database | TREEFAM | TREEFAM_ID | TF313437 | |
| DB_remark | contains similarity to Pfam domain PF14776 (Cation-channel complex subunit UNC-79); contains similarity to Interpro domains IPR024855 (UNC79), IPR016024 (Armadillo-type fold) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis japonica | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Visible | Gene | WBGene00133246 | |||
| Corresponding_transcript | CJA14042.1 | ||||
| Corresponding_protein | JA45966 | ||||
| Corresponding_oligo_set | GPL14145_CJA14042_222-281_0.744_319_C | ||||
| Matching_cDNA | japonica_GG857|c3_g3_i1 | Inferred_automatically | transcript_builder.pl | ||
| Microarray_results | GPL14145_CJA14042_222-281_0.744_319_C | ||||
| RNASeq_FPKM (4) | |||||
| Remark | based on Augustus prediction Cjap.Contig16302.g11013.t1[100726 mh6] | ||||
| Method | curated |
