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WormBase Tree Display for CDS: CJA18287

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Name Class

CJA18287EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig17934
StructureSource_exons (11)
DB_infoDatabaseTREEFAMTREEFAM_IDTF353541
DB_remarkCJP-LON-2 protein; contains similarity to Interpro domain IPR001863 (Glypican)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00137492
Corresponding_transcriptCJA18287.1
Corresponding_proteinJA66499
Corresponding_oligo_setGPL14145_CJA10171_224-283_0.951_2_A
GPL14145_CJA18287_691-750_0.881_20_C
GPL14145_CJA18287_808-867_0.922_2_B
GPL14145_CJA18287_1136-1195_0.911_5_A
Matching_cDNAjaponica_GG1832|c1_g1_i1Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA10171_224-283_0.951_2_A
GPL14145_CJA18287_1136-1195_0.911_5_A
GPL14145_CJA18287_691-750_0.881_20_C
GPL14145_CJA18287_808-867_0.922_2_B
RNASeq_FPKMWBls:000000420.9147From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000278.4106From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000386.09334From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
7.6519From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004113.6923From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
18.5575From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
25.0943From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
25.2659From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
4.66545From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
7.69735From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
8.10733From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
9.23291From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
Remarkbased on Augustus prediction Cjap.Contig17934.g22013.t1[100726 mh6]
Methodcurated