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WormBase Tree Display for CDS: CJA41853

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Name Class

CJA41853SMapS_parentSequenceCjap.Contig7741
StructureSource_exons1132
20112202
DB_infoDB_remarkCJP-CEH-6.1 protein; contains similarity to Interpro domain IPR009057 (Homeobox-like domain superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00217701
Corresponding_transcriptCJA41853.1
Corresponding_proteinJA62057
Corresponding_oligo_setGPL14145_CJA14215_682-741_0.937_3_B
Microarray_resultsGPL14145_CJA14215_682-741_0.937_3_B
RNASeq_FPKMWBls:00000041.10611From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
1.13942From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2.44248From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
2.69204From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
2.82647From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
3.71821From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
4.33566From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
Remarkbased on Augustus prediction Cjap.Contig7741.g5465.t1[100726 mh6]
Methodcurated