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WormBase Tree Display for CDS: CJA42970a

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Name Class

CJA42970aSMapS_parentSequenceCjap.Contig5594
StructureSource_exons190
12291633
19672070
28143099
40204034
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Isoform
VisibleGeneWBGene00218818
Corresponding_transcriptCJA42970a.1
Corresponding_proteinJA63039
Matching_cDNAjaponica_GG6240|c0_g1_i1Inferred_automaticallytranscript_builder.pl
japonica_GG6240|c0_g1_i2Inferred_automaticallytranscript_builder.pl
japonica_GG6240|c0_g1_i3Inferred_automaticallytranscript_builder.pl
japonica_GG6240|c0_g2_i1Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:000000415.1381From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000278.73092From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003810.3747From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
4.00333From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.810602From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.818694From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
12.3347From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
1.28113From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
15.3428From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
3.09467From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
7.33485From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
7.44105From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
Remarkbased on Augustus prediction Cjap.Contig5594.g3972.t2[100726 mh6]
Methodcurated