WormBase Tree Display for CDS: CRE00513
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CRE00513 | SMap | S_parent | Sequence | Crem_Contig0 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 28 | ||
79 | 207 | ||||
259 | 350 | ||||
417 | 590 | ||||
638 | 777 | ||||
826 | 1087 | ||||
1180 | 1707 | ||||
1756 | 1931 | ||||
1988 | 2231 | ||||
DB_info | Database | TREEFAM | TREEFAM_ID | TF313242 | |
DB_remark | CRE-UNC-18 protein; contains similarity to Pfam domain PF00995 (Sec1 family); contains similarity to Interpro domains IPR001619 (Sec1-like protein), IPR036045 (Sec1-like superfamily), IPR027482 (Sec1-like, domain 2) | ||||
Origin (2) | |||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | WBGene00051283 | |||
Corresponding_transcript | CRE00513.1 | ||||
Corresponding_protein | RP02038 | ||||
Corresponding_oligo_set | GPL14146_CRE00513_1295-1354_0.938_6_C | ||||
GPL14146_CRE00513_1420-1479_0.939_5_B | |||||
GPL14146_CRE00513_1562-1621_0.963_1_A | |||||
Matching_cDNA | DY527442 | Inferred_automatically | transcript_builder.pl | ||
DT936245 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14146_CRE00513_1295-1354_0.938_6_C | ||||
GPL14146_CRE00513_1420-1479_0.939_5_B | |||||
GPL14146_CRE00513_1562-1621_0.963_1_A | |||||
RNASeq_FPKM (6) | |||||
Method | curated |