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WormBase Tree Display for CDS: CRE04853

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Name Class

CRE04853SMapS_parentSequenceCrem_Contig12
StructureSource_exons160
24992723
27702937
29843088
31914060
41084215
DB_infoDatabaseTREEFAMTREEFAM_IDTF300567
DB_remarkCRE-RML-1 protein; contains similarity to Pfam domain PF01704 (UTP--glucose-1-phosphate uridylyltransferase); contains similarity to Interpro domains IPR029044 (Nucleotide-diphospho-sugar transferases), IPR016267 (UTP--glucose-1-phosphate uridylyltransferase), IPR002618 (UDPGP family)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis remanei
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00055863
Corresponding_transcriptCRE04853.1
Corresponding_proteinRP33010
Corresponding_oligo_setGPL14146_CRE04853_938-997_0.912_17_C
GPL14146_CRE04853_1014-1073_0.929_11_B
GPL14146_CRE04853_1204-1263_0.903_26_A
Matching_cDNADY528499Inferred_automaticallytranscript_builder.pl
DR779955Inferred_automaticallytranscript_builder.pl
DR777658Inferred_automaticallytranscript_builder.pl
DR778037Inferred_automaticallytranscript_builder.pl
DR776813Inferred_automaticallytranscript_builder.pl
DR781249Inferred_automaticallytranscript_builder.pl
DR778440Inferred_automaticallytranscript_builder.pl
DR780960Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14146_CRE04853_1014-1073_0.929_11_B
GPL14146_CRE04853_1204-1263_0.903_26_A
GPL14146_CRE04853_938-997_0.912_17_C
RNASeq_FPKMWBls:00000048.65044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
8.76721From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (54)
WBls:0000027167.579From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
185.3From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
188.236From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
42.3597From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038151.534From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
154.899From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
34.9704From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041108.005From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
108.796From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
124.359From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
256.845From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
266.205From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
271.655From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063129.787From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
131.445From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
132.041From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
132.12From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
132.388From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
135.719From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
138.985From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
140.909From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
141.445From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
88.1736From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
Methodcurated