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WormBase Tree Display for CDS: CRE10205

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Name Class

CRE10205SMapS_parentSequenceCrem_Contig19
StructureSource_exons1132
190306
354953
10031104
11541381
DB_infoDatabaseTREEFAMTREEFAM_IDTF300010
DB_remarkcontains similarity to Pfam domain PF00557 (Metallopeptidase family M24); contains similarity to Interpro domains IPR004545 (PA2G4 family), IPR036390 (Winged helix DNA-binding domain superfamily), IPR000994 (Peptidase M24), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR036005 (Creatinase/aminopeptidase-like)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis remanei
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00059495
Corresponding_transcriptCRE10205.1
Corresponding_proteinRP14308
Corresponding_oligo_setGPL14146_CRE10205_792-851_0.936_3_A
GPL14146_CRE10205_886-945_0.931_6_B
GPL14146_CRE10205_976-1035_0.914_12_C
Matching_cDNADR778572Inferred_automaticallytranscript_builder.pl
DR780351Inferred_automaticallytranscript_builder.pl
DT935218Inferred_automaticallytranscript_builder.pl
DR781368Inferred_automaticallytranscript_builder.pl
DR777721Inferred_automaticallytranscript_builder.pl
DR778182Inferred_automaticallytranscript_builder.pl
DR779962Inferred_automaticallytranscript_builder.pl
DR408673Inferred_automaticallytranscript_builder.pl
DR782192Inferred_automaticallytranscript_builder.pl
DT935063Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14146_CRE10205_792-851_0.936_3_A
GPL14146_CRE10205_886-945_0.931_6_B
GPL14146_CRE10205_976-1035_0.914_12_C
RNASeq_FPKMWBls:0000004551.932From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
557.637From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (54)
WBls:0000027433.065From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
507.201From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
513.436From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
53.7368From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038332.446From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
343.848From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
83.4648From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041168.213From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
169.474From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
181.278From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
401.409From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
423.153From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
432.556From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063132.347From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
147.052From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
148.104From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
150.255From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
169.304From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
200.38From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
200.408From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
206.032From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
223.81From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
226.838From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
Methodcurated