WormBase Tree Display for Sequence: F08B6

F08B6 DNA: F08B6 21081
  SMap: S_child: Gene_child: WBGene00017239 5755 6774
        WBGene00006819 13136 6560
        WBGene00200700 2514 2572
        WBGene00017240 5518 3520
        WBGene00001682 3102 3517
        WBGene00219882 13884 13724
      CDS_child: F08B6.1 5771 6691
        F08B6.1:wp154 5657 6691
        F08B6.2 3107 3346
        F08B6.3 5506 3577
        F08B6.3:wp102 5492 3577
        F08B6.3:wp236 5506 3577
        F08B6.4a 10949 7106
        F08B6.4b 13129 7106
        F08B6.4c:wp248 10886 7106
        F08B6.5:wp52 20831 19855
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g54n11_x14_I_p 5771 6685
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g10n11_x14_I_m 13129 7109
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g6n11_x14_I_p 3107 3343
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g125n11_x14_I_m 5506 3580
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g67_x14_I_m 10517 10346
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g78n11_x14_I_p 6047 6130
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g197_x14_I_m 1383 891
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g34n11e4k155_x14_I_m 1102 500
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g3n11_x14_I_m 9814 8856
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g66n11_x14_I_m 1494 72
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g8n11_x14_I_p 3107 3343
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g13_x14_I_m 10118 7109
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g133_x14_I_m 5506 5310
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g4n11_x14_I_m 13129 9930
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g105_x14_I_p 5771 6688
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g156_x14_I_m 4416 3580
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g7n11_x14_I_p 3107 3343
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g106n11_x14_I_p 5771 6688
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g4n11_x14_I_m 13129 13099
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g102n11_x14_I_m 10949 7109
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g140_x14_I_m 4674 3580
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g1n11_x14_I_m 10886 10346
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g115_x14_I_m 5506 5319
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g34n11_x14_I_p 5771 6685
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g83_x14_I_m 5282 5137
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g45_x14_I_m 5506 5295
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g25_x14_I_m 10118 9930
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g7n11_x14_I_p 3107 3343
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g91_x14_I_m 5111 4467
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g87_x14_I_m 4416 3580
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g19n11_x14_I_m 13129 7109
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g284_x14_I_m 559 3
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g6n11_x14_I_m 9814 8856
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g18n11_x14_I_m 12717 11781
        RNASEQ_embryo_him-8_20dC_post-L1_g16n11_x14_I_m 13129 7109
        RNASEQ_embryo_him-8_20dC_post-L1_g65n11_x14_I_m 5506 3580
        RNASEQ_embryo_him-8_20dC_post-L1_g5n11_x14_I_p 3107 3343
        RNASEQ_embryo_him-8_20dC_post-L1_g86n11_x14_I_p 5771 6688
        RNASEQ_embryo_him-8_20dC_post-L1_g39_x14_I_m 10118 9930
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g105n11_x14_I_p 5771 6688
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g13_x14_I_m 10517 7109
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g9n11_x14_I_p 3600 3827
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g64n11_x14_I_m 5506 3580
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g6n11_x14_I_m 13129 13099
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g164_x14_I_m 214 125
        RNASEQ_L4_soma_JK1107_no_DNaseI_g146_x14_I_m 959 752
        RNASEQ_L4_soma_JK1107_no_DNaseI_g86n11_x14_I_m 11504 11218
        RNASEQ_L4_soma_JK1107_no_DNaseI_g57n11_x14_I_p 5771 6685
        RNASEQ_L4_soma_JK1107_no_DNaseI_g58n11_x14_I_m 5506 3580
        RNASEQ_L4_soma_JK1107_no_DNaseI_g2n11_x14t1_I_m 13129 9930
        RNASEQ_L4_soma_JK1107_no_DNaseI_g7n11_x14_I_p 3107 3343
        RNASEQ_L4_soma_JK1107_no_DNaseI_g10_x14t1_I_m 10118 7109
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g28n11_x14_I_m 5506 3580
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g6n11_x14_I_m 13129 9930
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g15_x14_I_m 10118 7109
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g58n11_x14_I_p 5771 6688
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g3n11_x14_I_p 3600 3827
        RNASEQ_early_embryo_g41n11_x14_I_m 10949 7109
        RNASEQ_early_embryo_g97n11_x14_I_p 5771 6688
        RNASEQ_early_embryo_g80n11_x14_I_m 5506 3580
        RNASEQ_early_embryo_g6n11e2k308_x14_I_p 3600 3827
        RNASEQ_early_embryo_g51n11_x14_I_m 13129 13099
        RNASEQ_early_embryo_g6n11_x14_I_p 3107 3343
        RNASEQ_early_embryo_g19n11m4_x14_I_m 1102 500
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g33n11_x14t1_I_m 13129 13099
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g14n11_x14t1_I_m 10886 10346
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g102n11_x14t1_I_m 10949 7109
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g4n11_x14_I_p 3107 3343
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g101n11_x14t1_I_p 5771 6688
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g48n11_x14t1_I_m 4761 3580
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g234n11_x14_I_m 5506 5092
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g46n11m4_x14t1_I_m 1102 500
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g36n11_x14t1_I_m 5506 3580
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g9n11_x14t1_I_p 3107 3343
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g17n11_x14t1_I_m 10949 7109
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g3n11_x14t1_I_m 13129 13099
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g64n11_x14t1_I_p 5771 6688
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g29n11m4_x14t1_I_m 1102 500
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g47n11_x14t1_I_p 17981 20836
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g106_x14_I_m 16354 14633
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g20n11_x14t1_I_m 10949 7109
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g8n11_x14t1_I_m 13129 13099
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g60n11_x14_I_p 5771 6688
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g4n11_x14_I_p 3600 3827
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g72n11_x14_I_m 4761 3580
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g37n11_x14_I_m 5506 5092
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g8n11_x14_I_p 3600 3827
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g66n11_x14_I_m 5506 3580
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g4n11_x14t1_I_m 13129 13099
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g46n11_x14_I_p 5771 6688
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g20n11_x14t1_I_m 10949 7109
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g4n11_x14t1_I_m 13129 9930
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g159_x14_I_m 4674 3643
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g177_x14_I_m 5443 5098
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g23_x14t1_I_m 10118 7109
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g61n11_x14t1_I_p 5771 6688
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g10n11_x14t1_I_p 3107 3343
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g211_x14_I_m 2137 1468
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g178_x14_I_m 3328 3156
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g6n11_x14_I_m 13129 13099
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g87n11_x14_I_m 5506 5310
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g58n11_x14_I_p 5771 6688
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g192_x14_I_p 3107 3343
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g137_x14_I_m 4674 3580
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g50_x14_I_m 10517 7109
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g47n11e4k285_x14_I_m 1102 500
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g8n11_x14_I_m 9814 8856
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g103n11_x14_I_p 5771 6688
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g21n11_x14t1_I_m 13129 9930
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g5n11_x14_I_m 13134 10858
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g17_x14t1_I_m 10118 7109
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g6n11_x14_I_p 3107 3343
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g113n11_x14_I_m 5506 5286
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g158_x14_I_m 4674 3589
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g50n11_x14_I_p 5771 6688
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g216_x14_I_p 3600 3824
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g5n11_x14_I_m 13129 8602
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g17n11_x14_I_m 8733 7109
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g119n11_x14_I_m 5506 3580
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g5n11e5k50_x14_I_m 8736 8554
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g163_x14_I_m 2170 1501
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g23_x14_I_m 10118 7109
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g106n11_x14_I_m 5506 5286
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g8n11_x14_I_m 13129 9930
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g64n11_x14_I_p 5771 6688
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g3n11_x14_I_p 3600 3827
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g146_x14_I_m 4674 3580
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g191_x14_I_m 446 107
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g11n11_x14t1_I_p 3107 3343
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g40n11_x14t1_I_p 5771 6688
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g38n11_x14t1_I_m 10118 7109
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g4n11_x14t1_I_m 13129 13099
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g94n11_x14t1_I_m 5506 3580
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g42n11_x14t1_I_m 10949 9930
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g159_x14_I_m 1383 1267
        F08B6.gc1 1685 215
        F08B6.gc2 3107 3346
        F08B6.gc3 5506 3577
        F08B6.gc4 5771 6691
        F08B6.gc5 7210 7106
        F08B6.gc6 10949 7978
        ContigI.elegans.jigsaw.1185.mRNA1185 11089 6791
        ContigI.elegans.jigsaw.1184.mRNA1184 4264 6773
        ContigI.elegans.jigsaw.1183.mRNA1183 6398 3524
        ContigI.elegans.jigsaw.1182.mRNA1182 3102 3518
        AG1201_F08B6.2.T7 1967 3346
        AG1201_F08B6.2.T3 3093 3346
        AG1201_F08B6.2.T6 3107 3346
        AG1201_F08B6.2.T5 3215 3346
        AG1201_F08B6.3.T3 3825 3577
        AG1201_F08B6.3.T4 4674 3577
        AG1201_F08B6.3.T7 5390 3577
        AG1201_F08B6.3.T8 5492 3577
        AG1201_F08B6.3.T2 5506 3577
        AG1201_F08B6.3.T1 5506 5008
        AG1201_F08B6.1.T3 5771 6691
        AG1201_F08B6.1.T2 5809 6691
        AG1201_F08B6.1.T1 5990 6193
        AG1201_F08B6.4.T11 7210 7106
        AG1201_F08B6.4.T5 9598 7106
        AG1201_F08B6.4.T10 10886 7106
        AG1201_F08B6.4.T8 10949 7106
        AG1201_F08B6.4.T12 13129 7106
        AG1201_F08B6.4.T2 9598 8953
        AG1201_F08B6.4.T3 10886 8956
        AG1201_F08B6.4.T1 10949 8956
        AG1201_F08B6.4.T4 13129 8956
      Transcript: F08B6.6 2514 2572
        F08B6.7 13884 13724
        F08B6.1.1 5755 6774
        F08B6.2.1 3102 3517
        F08B6.3.1 5518 3520
        F08B6.4a.1 11029 6560
        F08B6.4b.1 13136 6784
      Nongenomic: [cgc4576]:gpc-2 3107 3347
      PCR_product (19)
      Allele (165)
      Oligo_set: Aff_F08B6.A 20551 19855
        Aff_F08B6.B 9147 7106
        Aff_F08B6.C 4852 3577
        Aff_F08B6.E 3107 3346
        Aff_F08B6.F 5657 6691
      Feature_object (295)
      Feature_data: F08B6:Polysome 1 21081
        F08B6:TranscriptionallyActiveRegion 1 21081
        F08B6:ChIPSeqTF 1 21081
        F08B6:TRF 1 21081
        F08B6:Dust 1 21081
        F08B6:inverted 1 21081
      Homol_data (19)
  Structure: From: Source: CHROMOSOME_I
    Overlap_right: C37A2 19782
    Overlap_left: W02D3
    Clone_right_end: W02D3 850
      F08B6 20885
  DB_info: Database: EMBL NDB_AC FO080807
        NDB_ID _AF106590
        NDB_SV FO080807.1
    Secondary_accession: AF106590
    DB_remark: The 5' clone is W02D3, 1750 bp overlap; the 3' clone is C37A2, 1300 bp overlap. Actual start of this clone is at base position 27745 of W02D3; actual end is at 20885 of F08B6.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Le TT
      Scheet P
      Kemp K
    From_laboratory: RW
    Date: 23 Jan 1998 00:00:00
    Date_directory
    Species: Caenorhabditis elegans
  Visible: Clone: F08B6
  Properties: Genomic_canonical
    Checksum: MD5: 45a8c433162865bf5210612935c0624b
    Status: Shotgun
      Finished
      Submitted: 23 Jan 1998 00:00:00
  Map: Sequence-I
  Interpolated_map_position: I 1.31326
  Method: Genomic_canonical