WormBase Tree Display for CDS: F09B9.2a
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| F09B9.2a | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F09B9 | |||
| Structure | Source_exons (12) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q19240 | ||
| UniProt | UniProtAcc | Q19240 | ||||
| AlphaFold | entry | Q19240 | ||||
| NCBI_protein | GI_number | GI:3875561 | ||||
| Protein_id | CHROMOSOME_X | CAA90057 | 1 | |||
| DB_remark | UNC-115 protein; contains similarity to Pfam domains PF00412 (LIM domain), PF02209 (Villin headpiece domain); contains similarity to Interpro domains IPR003128 (Villin headpiece), IPR001781 (Zinc finger, LIM-type), IPR036886 (Villin headpiece domain superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | NDB | CEK097F4F | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00006839 | ||||
| Corresponding_transcript | F09B9.2a.1 | |||||
| Corresponding_protein | CE15759 | |||||
| Corresponding_PCR_product | cenix:54-c12 | |||||
| mv_AAC35506 | ||||||
| mv_F09B9.2 | ||||||
| sjj_F09B9.2 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (118) | ||||||
| RNAi_result (16) | ||||||
| Microarray_results | SMD_F09B9.2 | |||||
| 190640_s_at | ||||||
| A_12_P136225 | ||||||
| A_12_P136226 | ||||||
| Aff_F09B9.2 | ||||||
| GPL13394_WBGene00006839 | ||||||
| GPL13914_F09B9.2 | ||||||
| GPL14144_F09B9.2b_1222-1281_0.906_8_C | ||||||
| GPL14144_F09B9.2b_1384-1443_0.917_4_B | ||||||
| GPL14144_F09B9.2b_1834-1893_0.923_3_A | ||||||
| GPL3518_CE15759 | ||||||
| GPL8304_CE_WBGene00006839_A | ||||||
| GPL8304_CE_WBGene00006839_B | ||||||
| GPL8673_F09B9_2aP00648 | ||||||
| GPL8673_F09B9_2aP00997 | ||||||
| GPL8673_F09B9_2aP01478 | ||||||
| GPL8673_F09B9_2bP00690 | ||||||
| GPL8673_F09B9_2bP01039 | ||||||
| GPL8673_F09B9_2bP01520 | ||||||
| Brief_identification | Actin-binding lim zn-finger protein limatin involved in axon guidance | Accession_evidence | UniProt | TR:Q19240 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
