WormBase Tree Display for Sequence: F11C3

F11C3 DNA: F11C3 21455
  SMap: S_child: Gene_child: WBGene00008695 8654 12095
        WBGene00006845 12842 16166
      CDS_child: F11C3.1 8654 12095
        F11C3.1:wp196 8567 12095
        F11C3.2 12892 16108
        F11C3.2:wp252 12892 16108
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g172_x30_I_p 12892 12942
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g41_x30_I_m 20861 20745
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g169_x30_I_p 13903 13983
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g163_x30_I_p 10315 10451
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g36n11_x30_I_m 18751 17129
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g16n11_x30_I_m 18751 17129
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g23_x30_I_m 20861 20745
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g147_x30_I_p 10315 10502
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g23e4k145_x30_I_m 20861 20619
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g23s3k88_x30_I_m 20855 20745
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g40n11e2k500_x30_I_m 20855 20619
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g137_x30_I_p 13013 13066
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g12n11s10k158_x30_I_m 18751 17129
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g12n11s9k62_x30_I_m 20855 20745
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g139_x30_I_p 15193 16003
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g132n11_x30_I_p 8654 8826
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g142_x30_I_p 12892 12942
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g131_x30_I_p 13736 13959
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g154_x30_I_p 14622 14687
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g156_x30_I_m 2725 2202
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g100_x30_I_m 1364 1233
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g80_x30_I_m 4180 2730
        RNASEQ_embryo_him-8_20dC_post-L1_g126_x30_I_p 12892 13046
        RNASEQ_embryo_him-8_20dC_post-L1_g134_x30_I_p 15998 16054
        RNASEQ_embryo_him-8_20dC_post-L1_g121_x30_I_p 14892 15027
        RNASEQ_embryo_him-8_20dC_post-L1_g175_x30_I_p 13903 13974
        RNASEQ_embryo_him-8_20dC_post-L1_g30n11_x30_I_m 18751 18695
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g119_x30_I_p 13903 14591
        RNASEQ_L4_soma_JK1107_no_DNaseI_g45n11_x30_I_m 18751 18695
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g116_x30_I_p 15103 16051
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g122_x30_I_p 13190 13249
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g109_x30_I_p 10315 10679
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g21s4k111_x30_I_m 18751 18695
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g92n11_x30_I_p 8654 10037
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g126_x30_I_p 13628 13696
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g121_x30_I_p 14922 15081
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g114_x30_I_p 13903 14582
        RNASEQ_early_embryo_g18e4k390_x30_I_m 20861 20619
        RNASEQ_early_embryo_g136_x30_I_p 13429 13566
        RNASEQ_early_embryo_g126_x30_I_p 10069 10709
        RNASEQ_early_embryo_g125n11_x30_I_p 8654 8949
        RNASEQ_early_embryo_g115_x30_I_p 13628 16039
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g125n11e4k87_x30_I_p 10421 10709
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g135_x30_I_p 12892 12942
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g129_x30_I_p 13194 13557
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g17n11e3k571_x30t1_I_m 20861 20619
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g111n11e2k571_x30t1_I_m 20855 20619
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g111n11s2k409_x30t1_I_m 18751 18695
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g111n11_x30t1_I_m 20855 17129
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g117_x30_I_p 13628 16105
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g125n11_x30_I_p 10069 12092
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g107_x30_I_p 12892 13052
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g125_x30_I_p 10069 10592
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g34s3k205_x30t1_I_m 20855 20745
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g34s4k439_x30t1_I_m 18751 18695
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g112_x30_I_p 13194 16090
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g28n11e3k622_x30t1_I_m 20861 20619
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g114_x30_I_p 13194 16105
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g28n11s3k176_x30t1_I_m 18751 18695
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g149_x30_I_p 8821 8919
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g28n11s2k203_x30t1_I_m 20855 20745
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g125_x30_I_p 14892 16096
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g123_x30_I_p 13194 13458
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g126_x30_I_p 12892 13067
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g135_x30_I_p 13628 13693
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g31s4k77_x30t1_I_m 18751 18695
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g117_x30_I_p 13736 14846
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g136_x30_I_p 13194 13314
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g140_x30_I_p 13924 13983
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g138_x30_I_p 13465 13563
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g50s4k53_x30_I_m 18751 18695
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g173_x30_I_p 8893 8970
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g169_x30_I_p 15205 15958
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g172_x30_I_p 13203 13347
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g131_x30_I_p 10315 10421
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g170_x30_I_p 13924 14576
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g82n11_x30_I_p 8654 8856
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g81n11_x30_I_p 8654 8811
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g154_x30_I_p 13519 13566
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g35s4k62_x30_I_m 18751 18695
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g148_x30_I_p 13736 13983
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g157_x30_I_p 8890 8970
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g153_x30_I_p 13903 13956
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g25n11_x30_I_m 18751 17129
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g44n11_x30_I_m 18751 17129
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g160_x30_I_p 13903 14600
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g168_x30_I_p 14976 15090
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g165_x30_I_p 10357 10538
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g167_x30_I_p 15193 15973
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g34n11s3k53_x30_I_m 18751 18695
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g142_x30_I_p 13245 13371
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g123_x30_I_p 13903 13983
        F11C3.gc1 3027 366
        F11C3.gc2 4180 3217
        F11C3.gc3 8654 9581
        F11C3.gc4 10069 12095
        F11C3.gc5 12892 16108
        F11C3.gc6 19723 17126
        ContigI.elegans.jigsaw.2849.mRNA2849 12839 16136
        ContigI.elegans.jigsaw.2848.mRNA2848 8499 12199
        AG1201_F11C3.3.T1 4180 1906
        AG1201_RIT1P.851.T1 2643 2765
        AG1201_F11C3.1.T3 8821 10368
        AG1201_F11C3.1.T2 8948 12095
        AG1201_F11C3.1.T6 10069 10712
        AG1201_F11C3.1.T5 10069 11719
        AG1201_F11C3.1.T4 10069 12095
        AG1201_F11C3.1.T1 11994 12095
        AG1201_F11C3.2.T5 12892 14790
        AG1201_F11C3.2.T6 12892 14790
        AG1201_F11C3.2.T2 12892 16108
        AG1201_F11C3.2.T3 12892 16108
        AG1201_F11C3.2.T1 13194 16108
        AG1201_ZK270.2.T9 18751 17126
      Transcript: F11C3.1.1 8654 12095
        F11C3.2.1 12842 16166
      PCR_product: cenix:147-a1 12731 13923
        cenix:93-h11 9968 10830
        mv_F11C3.1 8568 12093
        mv_F11C3.2 12893 16106
        p_F11C3.3_93 4181 6181
        sjj_F11C3.1 8430 10693
        sjj_F11C3.2 12921 13923
      Allele (446)
      Oligo_set: Aff_F11C3.1 10488 12095
        Aff_F11C3.2 14955 16108
        Aff_ZK270.2A 19702 17126
      Feature_object (173)
      Feature_data: F11C3:Polysome 1 21455
        F11C3:TranscriptionallyActiveRegion 1 21455
        F11C3:ChIPSeqTF 1 21455
        F11C3:TRF 1 21455
        F11C3:Dust 1 21455
        F11C3:inverted 1 21455
      Homol_data (19)
  Structure: From: Source: CHROMOSOME_I
    Overlap_right: ZK270 21342
    Overlap_left: F32A7
    Clone_left_end: F11C3 1
      ZK270 21342
    Clone_right_end: F32A7 7715
  DB_info: Database: EMBL NDB_AC Z81499
        NDB_SV Z81499.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Kershaw JK
    From_laboratory: HX
    Date_directory: 961128
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: F11C3
  Properties: Genomic_canonical
    Checksum: MD5: 4d9f61b0a8830b08af0a93f5241d1e73
    Status: Finished: 28 Nov 1996 00:00:00
      Submitted: 06 Nov 1996 00:00:00
      Annotated: 13 Feb 1997 00:00:00
  Map: Sequence-I Ends: Left: 7399
        Right: 7418
  Interpolated_map_position: I 27.9679
  Assembly_tags: Clone left end 1 4 F11C3
      21342 21345 ZK270
    Finished Left 1 4
    Clone right end 7715 7712 F32A7
    annotation 17387 17406 one m13 clone reads 21 Ts here
    Finished Right 21455 21449
  Method: Genomic_canonical