WormBase Tree Display for Sequence: F11C3

F11C3 DNA: F11C3 21455
  SMap: S_child: Gene_child: WBGene00008695 8654 12095
        WBGene00006845 12842 16166
      CDS_child: F11C3.1 8654 12095
        F11C3.1:wp196 8567 12095
        F11C3.2 12892 16108
        F11C3.2:wp252 12892 16108
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g172_x30_I_p 12892 12942
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g41_x30_I_m 20861 20745
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g169_x30_I_p 13903 13983
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g163_x30_I_p 10315 10451
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g36n11_x30_I_m 18751 17129
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g16n11_x30_I_m 18751 17129
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g23_x30_I_m 20861 20745
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g147_x30_I_p 10315 10502
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g23e4k145_x30_I_m 20861 20619
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g23s3k88_x30_I_m 20855 20745
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g40n11e2k500_x30_I_m 20855 20619
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g137_x30_I_p 13013 13066
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g12n11s10k158_x30_I_m 18751 17129
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g12n11s9k62_x30_I_m 20855 20745
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g139_x30_I_p 15193 16003
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g132n11_x30_I_p 8654 8826
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g142_x30_I_p 12892 12942
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g131_x30_I_p 13736 13959
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g154_x30_I_p 14622 14687
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g156_x30_I_m 2725 2202
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g100_x30_I_m 1364 1233
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g80_x30_I_m 4180 2730
        RNASEQ_embryo_him-8_20dC_post-L1_g126_x30_I_p 12892 13046
        RNASEQ_embryo_him-8_20dC_post-L1_g134_x30_I_p 15998 16054
        RNASEQ_embryo_him-8_20dC_post-L1_g121_x30_I_p 14892 15027
        RNASEQ_embryo_him-8_20dC_post-L1_g175_x30_I_p 13903 13974
        RNASEQ_embryo_him-8_20dC_post-L1_g30n11_x30_I_m 18751 18695
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g119_x30_I_p 13903 14591
        RNASEQ_L4_soma_JK1107_no_DNaseI_g45n11_x30_I_m 18751 18695
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g116_x30_I_p 15103 16051
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g122_x30_I_p 13190 13249
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g109_x30_I_p 10315 10679
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g21s4k111_x30_I_m 18751 18695
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g92n11_x30_I_p 8654 10037
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g126_x30_I_p 13628 13696
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g121_x30_I_p 14922 15081
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g114_x30_I_p 13903 14582
        RNASEQ_early_embryo_g18e4k390_x30_I_m 20861 20619
        RNASEQ_early_embryo_g136_x30_I_p 13429 13566
        RNASEQ_early_embryo_g126_x30_I_p 10069 10709
        RNASEQ_early_embryo_g125n11_x30_I_p 8654 8949
        RNASEQ_early_embryo_g115_x30_I_p 13628 16039
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g125n11e4k87_x30_I_p 10421 10709
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g135_x30_I_p 12892 12942
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g129_x30_I_p 13194 13557
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g17n11e3k571_x30t1_I_m 20861 20619
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g111n11e2k571_x30t1_I_m 20855 20619
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g111n11s2k409_x30t1_I_m 18751 18695
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g111n11_x30t1_I_m 20855 17129
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g117_x30_I_p 13628 16105
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g125n11_x30_I_p 10069 12092
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g107_x30_I_p 12892 13052
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g125_x30_I_p 10069 10592
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g34s3k205_x30t1_I_m 20855 20745
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g34s4k439_x30t1_I_m 18751 18695
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g112_x30_I_p 13194 16090
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g28n11e3k622_x30t1_I_m 20861 20619
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g114_x30_I_p 13194 16105
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g28n11s3k176_x30t1_I_m 18751 18695
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g149_x30_I_p 8821 8919
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g28n11s2k203_x30t1_I_m 20855 20745
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g125_x30_I_p 14892 16096
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g123_x30_I_p 13194 13458
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g126_x30_I_p 12892 13067
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g135_x30_I_p 13628 13693
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g31s4k77_x30t1_I_m 18751 18695
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g117_x30_I_p 13736 14846
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g136_x30_I_p 13194 13314
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g140_x30_I_p 13924 13983
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g138_x30_I_p 13465 13563
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g50s4k53_x30_I_m 18751 18695
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g173_x30_I_p 8893 8970
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g169_x30_I_p 15205 15958
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g172_x30_I_p 13203 13347
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g131_x30_I_p 10315 10421
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g170_x30_I_p 13924 14576
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g82n11_x30_I_p 8654 8856
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g81n11_x30_I_p 8654 8811
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g154_x30_I_p 13519 13566
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g35s4k62_x30_I_m 18751 18695
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g148_x30_I_p 13736 13983
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g157_x30_I_p 8890 8970
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g153_x30_I_p 13903 13956
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g25n11_x30_I_m 18751 17129
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g44n11_x30_I_m 18751 17129
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g160_x30_I_p 13903 14600
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g168_x30_I_p 14976 15090
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g165_x30_I_p 10357 10538
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g167_x30_I_p 15193 15973
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g34n11s3k53_x30_I_m 18751 18695
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g142_x30_I_p 13245 13371
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g123_x30_I_p 13903 13983
        F11C3.gc1 3027 366
        F11C3.gc2 4180 3217
        F11C3.gc3 8654 9581
        F11C3.gc4 10069 12095
        F11C3.gc5 12892 16108
        F11C3.gc6 19723 17126
        ContigI.elegans.jigsaw.2849.mRNA2849 12839 16136
        ContigI.elegans.jigsaw.2848.mRNA2848 8499 12199
        AG1201_F11C3.3.T1 4180 1906
        AG1201_RIT1P.851.T1 2643 2765
        AG1201_F11C3.1.T3 8821 10368
        AG1201_F11C3.1.T2 8948 12095
        AG1201_F11C3.1.T6 10069 10712
        AG1201_F11C3.1.T5 10069 11719
        AG1201_F11C3.1.T4 10069 12095
        AG1201_F11C3.1.T1 11994 12095
        AG1201_F11C3.2.T5 12892 14790
        AG1201_F11C3.2.T6 12892 14790
        AG1201_F11C3.2.T2 12892 16108
        AG1201_F11C3.2.T3 12892 16108
        AG1201_F11C3.2.T1 13194 16108
        AG1201_ZK270.2.T9 18751 17126
      Transcript: F11C3.1.1 8654 12095
        F11C3.2.1 12842 16166
      PCR_product: cenix:147-a1 12731 13923
        cenix:93-h11 9968 10830
        mv_F11C3.1 8568 12093
        mv_F11C3.2 12893 16106
        p_F11C3.3_93 4181 6181
        sjj_F11C3.1 8430 10693
        sjj_F11C3.2 12921 13923
      Allele (446)
      Oligo_set: Aff_F11C3.1 10488 12095
        Aff_F11C3.2 14955 16108
        Aff_ZK270.2A 19702 17126
      Feature_object: WBsf986245 3021 3171
        WBsf986246 4301 4451
        WBsf986247 5781 5931
        WBsf986248 7121 7271
        WBsf986249 8321 8471
        WBsf986250 11621 11708
        WBsf1011302 3041 3191
        WBsf1011303 4301 4451
        WBsf1011304 7141 7291
        WBsf027456 4213 4212
        WBsf048936 16553 16553
        WBsf050004 2729 2729
        WBsf050005 17092 17092
        WBsf051785 13048 13048
        WBsf051786 13976 13976
        WBsf052676 16551 16551
        WBsf054145 16562 16562
        WBsf054543 10593 10593
        WBsf122710 8643 8644
        WBsf122711 19724 19723
        WBsf123677 19724 19723
        WBsf133318 21270 21270
        WBsf133666 16553 16553
        WBsf134524 20121 20121
        WBsf135308 16551 16551
        WBsf135789 2729 2729
        WBsf135790 17092 17092
        WBsf136217 8858 8858
        WBsf136218 16554 16554
        WBsf140136 16562 16562
        WBsf140137 20243 20243
        WBsf140138 21244 21244
        WBsf140712 16765 16765
        WBsf146077 16553 16552
        WBsf220669 17125 16475
        WBsf220670 17125 16555
        WBsf220671 17125 16574
        WBsf220672 17125 16765
        WBsf220673 17125 16964
        WBsf240635 16342 16343
        WBsf240636 16267 16268
        WBsf240637 16165 16166
        WBsf240638 16554 16553
        WBsf268855 16565 16564
        WBsf269194 1908 1907
        WBsf603031 16135 16136
        WBsf603305 16149 16150
        WBsf604296 16742 16741
        WBsf604502 16624 16623
        WBsf605180 16568 16567
        WBsf606264 16475 16474
        WBsf607048 6580 6581
        WBsf947208 2757 2756
        WBsf947209 3556 3555
        WBsf947210 11696 11697
        WBsf947211 18081 18080
        WBsf280587 2145 3348
        WBsf280616 5552 6550
        WBsf280625 19670 20689
        WBsf280709 3553 4474
        WBsf280748 16170 16738
        WBsf280937 17999 18352
        WBsf281242 16971 17190
        WBsf281288 6842 6871
        WBsf281433 19394 19450
        WBsf281511 8297 8578
        WBsf282449 16067 16674
        WBsf282565 17077 17079
        WBsf282715 18386 18530
        WBsf282980 775 800
        WBsf282998 19089 19258
        WBsf283045 20104 20409
        WBsf283936 16470 16545
        WBsf287625 8293 8628
        WBsf288518 4281 4395
        WBsf290700 8201 8776
        WBsf291726 5586 5960
        WBsf292154 4190 4501
        WBsf292361 6325 6579
        WBsf292466 20420 20707
        WBsf292867 7014 7121
        WBsf294309 16716 16974
        WBsf294752 19672 19699
        WBsf295198 2891 3169
        WBsf299294 8370 8645
        WBsf299648 2889 3238
        WBsf302519 1129 4435
        WBsf303351 73 722
        WBsf303370 16203 16721
        WBsf303857 20987 21168
        WBsf304450 6353 6470
        WBsf304454 17918 18087
        WBsf304584 17159 17197
        WBsf304595 20241 20459
        WBsf305126 5789 5988
        WBsf306606 2884 3188
        WBsf306704 4195 4549
        WBsf307245 16012 17142
        WBsf308202 19074 19319
        WBsf311798 16860 16933
        WBsf311909 15915 16151
        WBsf312758 16198 17045
        WBsf313208 2824 3546
        WBsf313616 4061 4378
        WBsf313828 2413 3800
        WBsf313914 16335 16916
        WBsf314098 1592 3674
        WBsf314676 4087 4574
        WBsf315159 20275 20713
        WBsf315579 16308 16455
        WBsf315787 18684 18862
        WBsf315887 17986 18153
        WBsf316336 5723 5815
        WBsf316447 19926 19992
        WBsf316829 415 442
        WBsf318257 16521 16988
        WBsf318329 4091 4338
        WBsf320107 15871 16398
        WBsf320386 19952 20012
        WBsf320663 729 1609
        WBsf320732 18677 18702
        WBsf320784 4094 4316
        WBsf320984 2602 3465
        WBsf321250 16276 16905
        WBsf321582 16426 16739
        WBsf323989 15920 16297
        WBsf324757 8327 8684
        WBsf325949 8321 8669
        WBsf327292 8359 8648
        WBsf329822 8351 8628
        WBsf330289 20457 20938
        WBsf330563 16754 16801
        WBsf330803 4104 4408
        WBsf330908 18615 18888
        WBsf331453 15994 17312
        WBsf334807 16195 16311
        WBsf335674 2867 3171
        WBsf335965 2898 3086
        WBsf336192 15165 15212
        WBsf336253 2873 3056
        WBsf337162 5742 5781
        WBsf339067 8322 8618
        WBsf340610 15945 17305
        WBsf340938 2839 4401
        WBsf045829 16586 16929
        WBsf919618 3111 3099
        WBsf919619 3098 3080
        WBsf919620 3075 3062
        WBsf919621 3037 3027
        WBsf643864 12863 12921
        WBsf649783 4270 4168
        WBsf665175 893 875
        WBsf665176 1214 1202
        WBsf665177 1500 1479
        WBsf665178 2574 2551
        WBsf665179 3013 2936
        WBsf665180 17999 17976
        WBsf665181 18851 18830
        WBsf674998 3092 3250
        WBsf674999 4466 4554
        WBsf675000 5984 5992
        WBsf675001 6384 6398
        WBsf675002 6449 6504
        WBsf675003 7124 7135
        WBsf675004 7217 7237
        WBsf696424 5774 5662
        WBsf696425 6416 6337
        WBsf696426 8370 8370
        WBsf696427 8474 8465
        WBsf696428 8817 8815
        WBsf696429 8893 8845
        WBsf696430 9062 9051
        WBsf919617 3111 3022
      Feature_data: F11C3:Polysome 1 21455
        F11C3:TranscriptionallyActiveRegion 1 21455
        F11C3:ChIPSeqTF 1 21455
        F11C3:TRF 1 21455
        F11C3:Dust 1 21455
        F11C3:inverted 1 21455
      Homol_data (19)
  Structure: From: Source: CHROMOSOME_I
    Overlap_right: ZK270 21342
    Overlap_left: F32A7
    Clone_left_end: F11C3 1
      ZK270 21342
    Clone_right_end: F32A7 7715
  DB_info: Database: EMBL NDB_AC Z81499
        NDB_SV Z81499.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Kershaw JK
    From_laboratory: HX
    Date_directory: 961128
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: F11C3
  Properties: Genomic_canonical
    Checksum: MD5: 4d9f61b0a8830b08af0a93f5241d1e73
    Status: Finished: 28 Nov 1996 00:00:00
      Submitted: 06 Nov 1996 00:00:00
      Annotated: 13 Feb 1997 00:00:00
  Map: Sequence-I Ends: Left: 7399
        Right: 7418
  Interpolated_map_position: I 27.9679
  Assembly_tags: Clone left end 1 4 F11C3
      21342 21345 ZK270
    Finished Left 1 4
    Clone right end 7715 7712 F32A7
    annotation 17387 17406 one m13 clone reads 21 Ts here
    Finished Right 21455 21449
  Method: Genomic_canonical