WormBase Tree Display for Sequence: F16F9

F16F9 DNA: F16F9 31685
  SMap: S_child: Gene_child (19)
      CDS_child: F16F9.1 8674 11335
        F16F9.2 17040 12057
        F16F9.3 19127 21124
        F16F9.3:wp184 19127 19730
        F16F9.3a:wp271 19127 19730
        F16F9.4 24730 21447
        F16F9.5 31640 27406
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g91_x17_X_m 24467 22815
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g101_x17_X_m 22470 21450
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g89n11_x17_X_m 22942 22546
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g56n11_x17_X_p 8674 11332
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g110_x17_X_m 24527 24480
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g26n11_x17_X_p 8674 11332
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g107_x17_X_m 30285 29822
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g87_x17_X_m 28776 27680
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g121_x17_X_m 27570 27409
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g60n11_x17_X_m 24730 21450
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g85_x17_X_m 22942 22823
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g29n11_x17_X_p 8674 11332
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g62_x17_X_p 19310 21103
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g98_x17_X_m 24467 24304
        RNASEQ_embryo_him-8_20dC_post-L1_g42n11_x17_X_p 8674 11332
        RNASEQ_embryo_him-8_20dC_post-L1_g78_x17_X_m 22470 21480
        RNASEQ_embryo_him-8_20dC_post-L1_g107_x17_X_m 22885 22561
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g70_x17_X_p 19127 21121
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g56n11_x17_X_p 8674 10717
        RNASEQ_L4_soma_JK1107_no_DNaseI_g166_x17_X_m 29347 29226
        RNASEQ_L4_soma_JK1107_no_DNaseI_g149_x17_X_m 28556 28142
        RNASEQ_L4_soma_JK1107_no_DNaseI_g103_x17_X_m 16382 13205
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g113_x17_X_m 24730 24483
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g77_x17_X_m 24467 21450
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g82_x17_X_m 17040 12060
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g40n11_x17_X_p 8674 11332
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g67_x17_X_p 19127 21121
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g73_x17_X_m 31640 27409
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g62n11_x17_X_p 10520 10717
        RNASEQ_early_embryo_g100_x17_X_p 19310 19472
        RNASEQ_early_embryo_g60n11_x17_X_p 8674 11332
        RNASEQ_early_embryo_g66_x17_X_m 24730 21450
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g68n11_x17_X_p 8674 11332
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g77n11_x17_X_p 10511 11367
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g89n11_x17_X_m 24730 24578
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g71_x17t1_X_m 24467 21450
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g119_x17_X_p 19310 19369
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g118_x17_X_m 27918 27814
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g85_x17_X_m 31640 27409
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g66n11_x17t1_X_m 24730 21450
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g83n11_x17_X_m 17040 16893
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g58n11_x17_X_p 8674 11332
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g68_x17_X_m 16520 12060
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g99_x17_X_m 15743 15675
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g71_x17_X_p 19058 21121
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g97n11_x17_X_p 10511 11367
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g44n11_x17_X_m 24730 21450
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g92_x17_X_m 28776 27409
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g89_x17_X_m 16520 14992
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g97_x17_X_m 13479 13366
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g120_x17_X_m 29401 29327
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g163_x17_X_m 15744 15569
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g28n11_x17_X_m 24730 21450
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g135_x17_X_m 29252 29120
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g155_x17_X_m 22911 22758
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g151_x17_X_m 22533 22383
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g66n11_x17_X_p 10520 10717
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g27n11_x17_X_p 8674 11332
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g166_x17_X_m 24601 24498
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g101_x17_X_m 22942 22675
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g144_x17_X_m 22470 22302
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g135_x17_X_m 24467 24340
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g133_x17_X_m 22295 21579
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g48n11_x17_X_p 8674 11323
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g60n11_x17_X_p 10520 10717
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g80_x17_X_m 29264 28627
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g72n11_x17_X_m 17040 12830
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g113_x17_X_m 22942 21564
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g77_x17_X_m 27730 27526
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g125_x17_X_m 24601 24495
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g160_x17_X_p 19343 19478
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g146_x17_X_m 28776 28470
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g118_x17_X_m 15472 14458
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g135_x17_X_m 29401 29129
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g158_x17_X_m 13287 13085
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g134_x17_X_m 30332 29848
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g89_x17_X_m 24467 21450
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g46n11_x17_X_p 8674 11311
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g59n11_x17_X_p 10520 10717
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g107_x17_X_p 19593 19673
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g81_x17_X_p 10520 11332
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g86_x17_X_p 19310 19418
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g49_x17_X_m 24601 21450
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g146_x17_X_m 12847 12743
        F16F9.gc1 8674 11335
        F16F9.gc2 17040 12057
        F16F9.gc3 19058 19700
        F16F9.gc4 20681 20698
        F16F9.gc5 24730 21447
        F16F9.gc6 31640 27043
        ContigX.elegans.jigsaw.1338.mRNA1338 17134 11777
        ContigX.elegans.jigsaw.1340.mRNA1340 24804 21219
        ContigX.elegans.jigsaw.1337.mRNA1337 8624 11826
        ContigX.elegans.jigsaw.1339.mRNA1339 19045 21238
        AG1201_F16F9.1.T2 8674 11335
        AG1201_F16F9.1.T1 10520 11370
        AG1201_F16F9.2.T1 17040 12057
        AG1201_F16F9.2.T3 17040 12057
        AG1201_F16F9.3.T2 19058 19730
        AG1201_F16F9.3.T3 19058 21124
        AG1201_F16F9.3.T1 19310 21124
        AG1201_F16F9.4.T1 22942 21447
        AG1201_F16F9.4.T2 24730 21447
        AG1201_F16F9.4.T4 24730 22444
        AG1201_F16F9.4.T5 24730 22471
        AG1201_RIT6M.1151.T1 26593 26468
        AG1201_F16F9.5.T1 31640 27406
      Transcript (19)
      Pseudogene: F16F9.t1 20508 20439
      PCR_product (15)
      Allele (511)
      Oligo_set: Aff_F16F9.1 8674 11335
        Aff_F16F9.2 13189 12057
        Aff_F16F9.3 19127 19730
        Aff_F16F9.4 22689 21447
        Aff_F16F9.5 28514 27406
      Feature_object (155)
      Feature_data: F16F9:Polysome 1 31685
        F16F9:TranscriptionallyActiveRegion 1 31685
        F16F9:ChIPSeqTF 1 31685
        F16F9:TRF 1 31685
        F16F9:Dust 1 31685
        F16F9:inverted 1 31685
      Homol_data (17)
  Structure: From: Source: CHROMOSOME_X
    Overlap_right: T01B10 29886
    Overlap_left: F08F1
    Clone_left_end: T01B10 29886
      F16F9 1
  DB_info: Database: EMBL NDB_AC FO081090
        NDB_ID _U67956
        NDB_SV FO081090.1
    Secondary_accession: U67956
    DB_remark: The 5' clone is F08F1, 200 bp overlap; the 3' clone is T01B10, 1800 bp overlap. Actual start of this clone is at base position 1 of F16F9; actual end is at 6892 of T01B10.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Fulton B
    From_laboratory: RW
    Date: 11 Jun 1996 00:00:00
    Date_directory: 960607
    Species: Caenorhabditis elegans
  Visible: Clone: F16F9
  Properties: Genomic_canonical
    Checksum: MD5: 233d843f9940b5af0d2f8ee4bdaf85be
    Status: Shotgun
      Finished
      Submitted: 11 Jun 1996 00:00:00
  Map: Sequence-X
  Interpolated_map_position: X 0.000777143
  Method: Genomic_canonical