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WormBase Tree Display for CDS: F17E5.1a

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Name Class

F17E5.1aEvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF17E5
StructureSource_exons174
126238
10411224
25142609
26572739
27882963
34393534
39284035
46504746
48484933
60696182
87028776
96679750
1116611252
1130111415
1156411725
1182112074
1213212210
1233212439
1248912592
1263712763
1282112943
1299113151
1385914038
DB_infoDatabaseSwissProtUniProtAccP54936
UniProtIsoformAccP54936-1
UniProtUniProtAccP54936
UniProt_GCRPUniProtAccP54936
AlphaFoldentryP54936
NCBI_proteinGI_numberGI:13548307
Protein_idCHROMOSOME_XCAA907602
DB_remarkLIN-2 protein; contains similarity to Pfam domains PF00018 (SH3 domain), PF00069 (Protein kinase domain), PF00595 (PDZ domain), PF00625 (Guanylate kinase), PF02828 (L27 domain); contains similarity to Interpro domains IPR008145 (Guanylate kinase/L-type calcium channel beta subunit), IPR011009 (Protein kinase-like domain superfamily), IPR036028 (SH3-like domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR014775 (L27 domain, C-terminal), IPR001452 (SH3 domain), IPR000719 (Protein kinase domain), IPR020635 (Tyrosine-protein kinase, catalytic domain), IPR004172 (L27 domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformAccession_evidenceNDBCB395393
Inferred_automaticallytranscript_builder
Visible (12)
Methodcurated