WormBase Tree Display for CDS: F17E5.1a
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F17E5.1a | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F17E5 | ||
Structure | Source_exons | 1 | 74 | ||
126 | 238 | ||||
1041 | 1224 | ||||
2514 | 2609 | ||||
2657 | 2739 | ||||
2788 | 2963 | ||||
3439 | 3534 | ||||
3928 | 4035 | ||||
4650 | 4746 | ||||
4848 | 4933 | ||||
6069 | 6182 | ||||
8702 | 8776 | ||||
9667 | 9750 | ||||
11166 | 11252 | ||||
11301 | 11415 | ||||
11564 | 11725 | ||||
11821 | 12074 | ||||
12132 | 12210 | ||||
12332 | 12439 | ||||
12489 | 12592 | ||||
12637 | 12763 | ||||
12821 | 12943 | ||||
12991 | 13151 | ||||
13859 | 14038 | ||||
DB_info | Database | SwissProt | UniProtAcc | P54936 | |
UniProtIsoformAcc | P54936-1 | ||||
UniProt | UniProtAcc | P54936 | |||
UniProt_GCRP | UniProtAcc | P54936 | |||
AlphaFold | entry | P54936 | |||
NCBI_protein | GI_number | GI:13548307 | |||
Protein_id | CHROMOSOME_X | CAA90760 | 2 | ||
DB_remark | LIN-2 protein; contains similarity to Pfam domains PF00018 (SH3 domain), PF00069 (Protein kinase domain), PF00595 (PDZ domain), PF00625 (Guanylate kinase), PF02828 (L27 domain); contains similarity to Interpro domains IPR008145 (Guanylate kinase/L-type calcium channel beta subunit), IPR011009 (Protein kinase-like domain superfamily), IPR036028 (SH3-like domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR014775 (L27 domain, C-terminal), IPR001452 (SH3 domain), IPR000719 (Protein kinase domain), IPR020635 (Tyrosine-protein kinase, catalytic domain), IPR004172 (L27 domain) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | NDB | CB395393 | ||
Inferred_automatically | transcript_builder | ||||
Visible (12) | |||||
Method | curated |