WormBase Tree Display for Sequence: F19H6
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F19H6 | DNA | F19H6 | 29612 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00008960 | 3209 | 1988 | |
WBGene00195563 | 26849 | 26997 | ||||
WBGene00008957 | 16698 | 12527 | ||||
WBGene00008959 | 3993 | 5560 | ||||
WBGene00008958 | 9726 | 6757 | ||||
WBGene00196839 | 8095 | 8299 | ||||
WBGene00014340 | 6018 | 5947 | ||||
CDS_child (104) | ||||||
Transcript | F19H6.8 | 26849 | 26997 | |||
F19H6.9 | 8095 | 8299 | ||||
F19H6.t1 | 6018 | 5947 | ||||
F19H6.2.1 | 16698 | 12527 | ||||
F19H6.3.1 | 9726 | 6757 | ||||
F19H6.4.1 | 3993 | 5560 | ||||
F19H6.5.1 | 3209 | 1988 | ||||
Transposon | WBTransposon00000106 | 10971 | 10094 | |||
PCR_product (20) | ||||||
Allele (470) | ||||||
Oligo_set | Aff_F19H6.1 | 29400 | 28209 | |||
Aff_F19H6.2 | 14129 | 12840 | ||||
Aff_F19H6.3 | 7353 | 6319 | ||||
Aff_F19H6.4 | 4125 | 5420 | ||||
Aff_F19H6.5 | 2987 | 1989 | ||||
Aff_F19H6.6 | 766 | 1407 | ||||
Feature_object (160) | ||||||
Feature_data | F19H6:Polysome | 1 | 29612 | |||
F19H6:TranscriptionallyActiveRegion | 1 | 29612 | ||||
F19H6:ChIPSeqTF | 1 | 29612 | ||||
F19H6:TRF | 1 | 29612 | ||||
F19H6:Dust | 1 | 29612 | ||||
F19H6:inverted | 1 | 29612 | ||||
Homol_data (20) | ||||||
Structure | From | Source | CHROMOSOME_X | |||
Overlap_right | F17E5 | 29513 | ||||
Overlap_left | F42F12 | |||||
Clone_left_end | F19H6 | 1 | ||||
F17E5 | 29513 | |||||
Clone_right_end | F42F12 | 15535 | ||||
DB_info | Database | EMBL | NDB_AC | Z68115 | ||
NDB_SV | Z68115.1 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | McMurray AA | ||||
From_laboratory | HX | |||||
Date_directory | 950405 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | F19H6 | ||||
Reference | WBPaper00015215 | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 23c82492de05ab039949e8a03fb62649 | ||||
Status | Finished | 05 Apr 1995 00:00:00 | ||||
Submitted | 25 Nov 1995 00:00:00 | |||||
Annotated | 24 Nov 1995 00:00:00 | |||||
Map | Sequence-X | Ends | Left | 6678 | ||
Right | 6700 | |||||
Interpolated_map_position | X | 7.03441 | ||||
Assembly_tags | Clone left end | 1 | 4 | left hand end of F19H6 | ||
Beginning of F19H6 | ||||||
29513 | 29516 | Beginning of F17E5 | ||||
annotation | 10020 | 10035 | no + strand bases 10020 - 10034 (16b) but terminator on the -ve strand | |||
18287 | 18356 | Approx 70 bp missing - d.s. (caused by sequence dying after run of Gs) but available strand (+) is terminated. | ||||
18338 | 18358 | Run of 21 Gs : fairly confident of the number. Some + reads go through the run but no - reads | ||||
18359 | 18412 | Region of very poor quality d.s. (+) following run of 21 Gs. Terminator on both available strands but of poor quality (approx. 50 bp). | ||||
Clone right end | 15532 | 15535 | End of F42F12 | |||
Method | Genomic_canonical |