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WormBase Tree Display for CDS: F38A3.2

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Name Class

F38A3.2EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF38A3
StructureSource_exons183
2961133
DB_infoDatabaseTrEMBLUniProtAccQ20136
UniProtUniProtAccQ20136
UniProt_GCRPUniProtAccQ20136
AlphaFoldentryQ20136
NCBI_proteinGI_numberGI:3876828
Protein_idCHROMOSOME_IICAA901881
DB_remarkRAM-2 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00004300
Corresponding_transcriptF38A3.2.1
Corresponding_proteinCE02214
Corresponding_PCR_productcenix:184-c6
mv_F38A3.2
sjj_F38A3.2
Corresponding_oligo_set (22)
Matching_cDNA (289)
RNAi_resultWBRNAi00014522
WBRNAi00007391
WBRNAi00031938
WBRNAi00046667
Microarray_results (23)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:Q20136
RNASeq_FPKM (74)
Methodcurated