WormBase Tree Display for CDS: F40E10.4
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| F40E10.4 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_X | ||
| Structure | Source_exons (32) | ||||
| DB_info | Database | SwissProt | UniProtAcc | G5EFX6 | |
| UniProt | UniProtAcc | G5EFX6 | |||
| UniProt_GCRP | UniProtAcc | G5EFX6 | |||
| AlphaFold | entry | G5EFX6 | |||
| NCBI_protein | GI_number | GI:25004960 | |||
| TREEFAM | TREEFAM_ID | TF332887 | |||
| Protein_id | CHROMOSOME_X | CAA93668 | 3 | ||
| DB_remark | SLT-1 protein; contains similarity to Pfam domains PF00008 (EGF-like domain), PF00560 (Leucine Rich Repeat), PF01462 (Leucine rich repeat N-terminal domain), PF01463 (Leucine rich repeat C-terminal domain), PF02210 (Laminin G domain), PF12661 (Human growth factor-like EGF), PF13855 (Leucine rich repeat); contains similarity to Interpro domains IPR000483 (Cysteine-rich flanking region, C-terminal), IPR001611 (Leucine-rich repeat), IPR013320 (Concanavalin A-like lectin/glucanase domain superfamily), IPR006207 (Cystine knot, C-terminal), IPR003591 (Leucine-rich repeat, typical subtype), IPR001881 (EGF-like calcium-binding domain), IPR000742 (EGF-like domain), IPR001791 (Laminin G domain), IPR000372 (Leucine-rich repeat N-terminal domain), IPR032675 (Leucine-rich repeat domain superfamily), IPR013032 (EGF-like, conserved site) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible (12) | |||||
| Associated_feature | WBsf131845 | ||||
| Method | curated |
