WormBase Tree Display for CDS: F42G2.7a
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| F42G2.7a | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F42G2 | |||
| Structure | Source_exons | 1 | 369 | |||
| DB_info | Database | KEGG | KEGG_id | 1.14.11.18 | ||
| TrEMBL | UniProtAcc | G4SG26 | ||||
| UniProt | UniProtAcc | G4SG26 | ||||
| UniProt_GCRP | UniProtAcc | G4SG26 | ||||
| AlphaFold | entry | G4SG26 | ||||
| NCBI_protein | GI_number | GI:351062313 | ||||
| Protein_id | CHROMOSOME_II | CCD70287 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF05721 (Phytanoyl-CoA dioxygenase (PhyH)); contains similarity to Interpro domains IPR047128 (Phytanoyl-CoA dioxygenase), IPR008775 (Phytanoyl-CoA dioxygenase-like) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Isoform | Remark | RNASEQ_male_mid-L4_25dC_30hrs_post-L1_gF42G2.7 | ||||
| Visible | Gene | WBGene00044362 | ||||
| Corresponding_transcript | F42G2.7a.1 | |||||
| Corresponding_protein | CE38710 | |||||
| Corresponding_oligo_set (15) | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | phytanoyl-CoA dioxygenase | Accession_evidence | UniProt | TR:G4SG26 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 18 Jul 2011 00:00:00 | WBPerson1867 | ||||
| Remark | [20050513 po] made this model based on twinscan data | Curator_confirmed | WBPerson1867 | |||
| Method | curated |
