WormBase Tree Display for CDS: F47A4.2
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F47A4.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F47A4 | |||
Structure | Source_exons (19) | |||||
DB_info | Database | SwissProt | UniProtAcc | Q20497 | ||
UniProt | UniProtAcc | Q20497 | ||||
UniProt_GCRP | UniProtAcc | Q20497 | ||||
AlphaFold | entry | Q20497 | ||||
NCBI_protein | GI_number | GI:3877172 | ||||
TREEFAM | TREEFAM_ID | TF343498 | ||||
Protein_id | CHROMOSOME_X | CAA90064 | 1 | |||
DB_remark | DPY-22 protein; contains similarity to Pfam domains PF09497 (Transcription mediator complex subunit Med12), PF12145 (Eukaryotic Mediator 12 subunit domain); contains similarity to Interpro domains IPR019035 (Mediator complex, subunit Med12), IPR021990 (Mediator complex, subunit Med12, LCEWAV-domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00001081 | ||||
Corresponding_transcript | F47A4.2.1 | |||||
Corresponding_protein | CE16058 | |||||
Corresponding_PCR_product | cenix:53-h10 | |||||
mv_F47A4.2 | ||||||
sjj_F47A4.2 | ||||||
Corresponding_oligo_set | 173764_at | |||||
187986_s_at | ||||||
A_12_P111661 | ||||||
Aff_F47A4.2 | ||||||
GPL13394_WBGene00001081 | ||||||
GPL13914_F47A4.2 | ||||||
GPL14144_F47A4.2_2705-2764_0.807_114_C | ||||||
GPL14144_F47A4.2_5588-5647_0.806_116_A | ||||||
GPL14144_F47A4.2_8924-8983_0.821_85_B | ||||||
GPL19516_CGZ0022284 | ||||||
GPL21109_F47A4.2 | ||||||
GPL3518_CE16058 | ||||||
GPL8304_CE_WBGene00001081_A | ||||||
GPL8673_F47A4_2P09056 | ||||||
GPL8673_F47A4_2P09662 | ||||||
GPL8673_F47A4_2P09946 | ||||||
GPL9450_F47A4.2 | ||||||
cea2.p.145335 | ||||||
Matching_cDNA (68) | ||||||
RNAi_result (77) | ||||||
Microarray_results (20) | ||||||
Brief_identification | Mediator of RNA polymerase II transcription subunit 12 | Accession_evidence | UniProt | SP:Q20497 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |