WormBase Tree Display for Sequence: F48E8
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F48E8 | DNA | F48E8 | 35324 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00018609 | 21145 | 24768 | |
WBGene00018610 | 18147 | 21152 | ||||
WBGene00003055 | 31244 | 34773 | ||||
WBGene00018611 | 10358 | 17115 | ||||
WBGene00018613 | 5163 | 3279 | ||||
WBGene00044410 | 6580 | 5560 | ||||
WBGene00003901 | 7498 | 9905 | ||||
CDS_child (326) | ||||||
Transcript (13) | ||||||
Transposon | WBTransposon00000340 | 17839 | 16234 | |||
Nongenomic | yk298h6 | 31324 | 34710 | |||
yk358h7 | 1242 | 3211 | ||||
PCR_product (38) | ||||||
Allele (474) | ||||||
Oligo_set | Aff_F48E8.1 | 32843 | 34583 | |||
Aff_F48E8.2 | 22844 | 24177 | ||||
Aff_F48E8.3 | 19472 | 20812 | ||||
Aff_F48E8.4 | 14553 | 15737 | ||||
Aff_F48E8.5 | 8733 | 9530 | ||||
Aff_F48E8.6 | 2367 | 3061 | ||||
Aff_F48E8.7 | 4212 | 3404 | ||||
Feature_object (317) | ||||||
Feature_data | F48E8:Polysome | 1 | 35324 | |||
F48E8:TranscriptionallyActiveRegion | 1 | 35324 | ||||
F48E8:ChIPSeqTF | 1 | 35324 | ||||
F48E8:TRF | 1 | 35324 | ||||
F48E8:Dust | 1 | 35324 | ||||
F48E8:inverted | 1 | 35324 | ||||
Homol_data (20) | ||||||
Structure | From | Source | CHROMOSOME_III | |||
Overlap_right | R02F2 | 35125 | ||||
Overlap_left | T24G10 | |||||
Clone_left_end | F48E8 | 1597 | ||||
R02F2 | 35125 | |||||
Clone_right_end | T24G10 | 15310 | ||||
DB_info | Database | EMBL | NDB_AC | FO081421 | ||
NDB_ID | _U23514 | |||||
NDB_SV | FO081421.2 | |||||
Secondary_accession | U23514 | |||||
DB_remark | The 5' clone is T24G10, 1600 bp overlap; the 3' clone is R02F2, 200 bp overlap. Actual start of this clone is at base position 1597 of F48E8; actual end is at 3296 of R02F2. | |||||
[121025] Sequence correction WBsf267808 : Deletion A-1 bases @ 25072 | ||||||
[121025] Sequence correction WBsf268146 : Insertion C1 bases from @ 28747 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Couch J | ||||
From_laboratory | RW | |||||
Date | 14 Oct 1994 00:00:00 | |||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | F48E8 | ||||
Reference | WBPaper00015325 | |||||
Remark | [20100427 wnash] deleted -1 bp at position 24504 (between CGGTTTTGAA and AATTTCTTTT) | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | d540a3be568a078ed84096d5400d9a32 | ||||
Status | Finished | |||||
Submitted | 14 Oct 1994 00:00:00 | |||||
Map | Sequence-III | |||||
Interpolated_map_position | III | -1.64798 | ||||
Method | Genomic_canonical |