WormBase Tree Display for Sequence: F54A5
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| F54A5 | DNA | F54A5 | 40018 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00305445 | 24643 | 20956 | |
| WBGene00305444 | 1182 | 766 | ||||
| WBGene00197993 | 27215 | 27364 | ||||
| WBGene00018788 | 24650 | 17178 | ||||
| WBGene00018787 | 17547 | 11782 | ||||
| WBGene00200860 | 27364 | 27215 | ||||
| CDS_child (142) | ||||||
| Transcript (17) | ||||||
| Nongenomic | yk386a8 | 17247 | 21177 | |||
| PCR_product (16) | ||||||
| Allele (879) | ||||||
| Oligo_set | Aff_F54A5.B | 19809 | 17783 | |||
| Aff_F54A5.C | 14757 | 11803 | ||||
| Aff_F54A5.E | 38826 | 39882 | ||||
| Aff_C54G6.4 | 39021 | 39882 | ||||
| Aff_F54A5.A | 39764 | 39507 | ||||
| Feature_object (252) | ||||||
| Feature_data | F54A5:Polysome | 1 | 40018 | |||
| F54A5:TranscriptionallyActiveRegion | 1 | 40018 | ||||
| F54A5:ChIPSeqTF | 1 | 40018 | ||||
| F54A5:TRF | 1 | 40018 | ||||
| F54A5:Dust | 1 | 40018 | ||||
| F54A5:inverted | 1 | 40018 | ||||
| Homol_data (19) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | C54G6 | 39019 | ||||
| Overlap_left | Y34D9B | |||||
| Clone_left_end | F54A5 | 1 | ||||
| Clone_right_end | Y34D9B | 10000 | ||||
| F54A5 | 39022 | |||||
| DB_info | Database | EMBL | NDB_AC | FO080953 | ||
| NDB_ID | _AF106584 | |||||
| NDB_SV | FO080953.2 | |||||
| Secondary_accession | AF106584 | |||||
| DB_remark | The 5' clone is Y34D9B, 5500 bp overlap; the 3' clone is C54G6, 1000 bp overlap. Actual start of this clone is at base position 1 of F54A5; actual end is at 39022 of F54A5. | |||||
| [121025] Sequence correction: SNP 0 bases @ 16890 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Jones K | ||||
| Graves T | ||||||
| Ozersky P | ||||||
| Wilson R | ||||||
| From_laboratory | RW | |||||
| Date | 17 Feb 1998 00:00:00 | |||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | F54A5 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 1a81f72f2f9e9604f2052cdac07ecd86 | ||||
| Status | Finished | |||||
| Submitted | 17 Feb 1998 00:00:00 | |||||
| Map | Sequence-I | |||||
| Interpolated_map_position | I | -17.4201 | ||||
| Method | Genomic_canonical |
