WormBase Tree Display for Sequence: F54F12

F54F12 DNA: F54F12 32715
  SMap: S_child: Gene_child: WBGene00010072 20656 14630
        WBGene00010073 5253 14772
        WBGene00202410 21818 21596
        WBGene00219970 23592 23700
        WBGene00195333 21593 21815
        WBGene00195913 12861 12788
      CDS_child: F54F12.1 19299 14831
        F54F12.2:wp179 11834 14563
        F54F12.2a 5581 14563
        F54F12.2b 12769 14563
        F54F12.2c 10497 14563
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g85_x27_III_p 13066 14515
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g101_x27_III_m 17421 16430
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g99_x27_III_m 16408 15366
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g77_x27_III_m 15124 14864
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g93_x27_III_m 19299 19192
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g144_x27_III_m 16239 16133
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g94_x27_III_p 13833 14227
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g153_x27_III_p 10497 10571
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g85_x27_III_p 14213 14560
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g109_x27_III_p 13930 14186
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g186_x27_III_p 10497 10571
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g75_x27_III_m 19299 14834
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g118_x27_III_p 13099 14560
        RNASEQ_L4_soma_JK1107_no_DNaseI_g121_x27_III_p 13066 13916
        RNASEQ_L4_soma_JK1107_no_DNaseI_g116_x27_III_p 13977 14545
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g120_x27_III_p 8585 10574
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g103_x27_III_p 13066 14560
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g130_x27_III_m 16287 16088
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g128_x27_III_m 15124 15044
        RNASEQ_early_embryo_g109_x27_III_p 13102 14224
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g98_x27_III_p 13066 14560
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g134_x27_III_p 10497 10565
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g91_x27_III_p 13066 14560
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g113_x27_III_p 13977 14554
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g156_x27_III_p 10497 10562
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g104_x27_III_p 13066 13865
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g152_x27_III_p 14162 14245
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g135_x27_III_p 13101 13924
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g95_x27_III_m 17349 15243
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g199_x27_III_p 13066 13811
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g198_x27_III_m 15272 15179
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g197_x27_III_m 16287 16204
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g127_x27_III_p 13066 13817
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g147_x27_III_m 15250 15136
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g130_x27_III_p 492 1398
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g165_x27_III_p 14245 14517
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g104_x27_III_p 13066 13820
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g111_x27_III_p 13933 14162
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g121_x27_III_p 13945 14183
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g150_x27_III_p 495 700
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g138_x27_III_p 28036 28131
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g161_x27_III_m 16146 16081
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g114_x27_III_m 16777 16367
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g127_x27_III_m 15124 14858
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g125_x27_III_m 15916 15791
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g144_x27_III_p 14162 14233
        F54F12.gc1 25 1558
        F54F12.gc2 10497 14760
        F54F12.gc3 20531 14831
        F54F12.gc4 22362 22253
        ContigIII.elegans.jigsaw.2516.mRNA2516 19358 14783
        ContigIII.elegans.jigsaw.2515.mRNA2515 10497 14630
        AG1201_F54F12.2.T3 5581 14563
        AG1201_F54F12.2.T6 8585 14563
        AG1201_F54F12.2.T1 12769 14563
        AG1201_F54F12.2.T4 12769 14563
        AG1201_F54F12.1.T1 19299 14831
        AG1201_RIT3P.751.T1 27676 28026
      Transcript: F54F12.3 21593 21815
        F54F12.4 12861 12788
        F54F12.5 21818 21596
        F54F12.6 23592 23700
        F54F12.1.1 20656 14630
        F54F12.2a.1 5253 14772
        F54F12.2b.1 12769 14563
        F54F12.2c.1 10497 14563
      PCR_product: TH:322F11 16820 18377
        TH:326B7 12935 14550
        TH:334C4 16820 18377
        cenix:322-f11 16819 18378
        cenix:326-b7 12934 14551
        cenix:334-c4 16819 18378
        mv_F54F12.1 14833 19298
        mv_F54F12.2 11835 14561
        sjj_F54F12.1 17654 18823
        sjj_F54F12.2 12450 14680
      Allele (591)
      Oligo_set: Aff_F14F7.5 136 1497
        Aff_F54F12.1 15820 14831
        Aff_F54F12.2 12961 14563
      Feature_object (270)
      Feature_data: F54F12:Polysome 1 32715
        F54F12:TranscriptionallyActiveRegion 1 32715
        F54F12:ChIPSeqTF 1 32715
        F54F12:TRF 1 32715
        F54F12:Dust 1 32715
        F54F12:inverted 1 32715
      Homol_data (18)
  Structure: From: Source: CHROMOSOME_III
    Overlap_right: Y39E4B 32612
    Overlap_left: F14F7
    Clone_left_end: F54F12 1
    Clone_right_end: F14F7 11285
      F54F12 32715
  DB_info: Database: EMBL NDB_AC Z81548
        NDB_SV Z81548.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Barlow K
    From_laboratory: HX
    Date_directory: 970511
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: F54F12
  Properties: Genomic_canonical
    Checksum: MD5: ba29d665acf7743bef3d1c35d8da6695
    Status: Finished: 11 May 1997 00:00:00
      Submitted: 06 Nov 1996 00:00:00
      Annotated: 01 Jan 1980 00:00:00
  Map: Sequence-III Ends: Left: 6458
        Right: 6480
  Interpolated_map_position: III 20.7568
  Assembly_tags: annotation 31275 31256
    Clone left end 1 4 F54F12
    Finished Left 1 4 F54F12
    Clone right end 11282 11285 F14F7
      32715 32712 F54F12
    Finished Right 32712 32715 F54F12
  Method: Genomic_canonical