WormBase Tree Display for Sequence: F56A8
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| F56A8 | DNA | F56A8 | 40279 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00010142 | 38924 | 39858 | |
| WBGene00010139 | 10081 | 16108 | ||||
| WBGene00219977 | 30163 | 30277 | ||||
| WBGene00185001 | 7878 | 9667 | ||||
| WBGene00010141 | 19069 | 20135 | ||||
| WBGene00006798 | 30461 | 37090 | ||||
| WBGene00000774 | 22086 | 20135 | ||||
| WBGene00010140 | 16490 | 18241 | ||||
| CDS_child (306) | ||||||
| Transcript (16) | ||||||
| PCR_product (36) | ||||||
| Allele (680) | ||||||
| Oligo_set | Aff_F56A8.1 | 7993 | 9501 | |||
| Aff_F56A8.2 | 10200 | 10906 | ||||
| Aff_F56A8.3 | 14855 | 15739 | ||||
| Aff_F56A8.4 | 17013 | 18173 | ||||
| Aff_F56A8.5 | 19440 | 20088 | ||||
| Aff_F56A8.6 | 20816 | 20217 | ||||
| Aff_F56A8.7 | 32500 | 35510 | ||||
| Aff_F56A8.8 | 39167 | 39982 | ||||
| Feature_object (530) | ||||||
| Feature_data | F56A8:Polysome | 1 | 40279 | |||
| F56A8:TranscriptionallyActiveRegion | 1 | 40279 | ||||
| F56A8:ChIPSeqTF | 1 | 40279 | ||||
| F56A8:TRF | 1 | 40279 | ||||
| F56A8:Dust | 1 | 40279 | ||||
| F56A8:inverted | 1 | 40279 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_III | |||
| Overlap_right | Y43F4B | 40176 | ||||
| Overlap_left | Y43F4A | |||||
| Clone_left_end | F56A8 | 1 | ||||
| Clone_right_end | F56A8 | 40279 | ||||
| Y39E4 | 39254 | |||||
| DB_info | Database | EMBL | NDB_AC | Z83230 | ||
| NDB_SV | Z83230.2 | |||||
| DB_remark | [121025] Sequence correction: SNP 0 bases @ 35100 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | McMurray AA | ||||
| From_laboratory | HX | |||||
| Date_directory | 970731 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F56A8 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | e8deea5da5e7d9ea2db995c3408caca4 | ||||
| Status | Finished | 31 Jul 1997 00:00:00 | ||||
| Submitted | 09 Dec 1996 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-III | Ends | Left | 6568 | ||
| Right | 6588 | |||||
| Interpolated_map_position | III | 21.1649 | ||||
| Assembly_tags | Clone left end | 4 | 1 | F56A8 | ||
| Finished Left | 4 | 1 | F56A8 | |||
| annotation | 11363 | 11357 | read 558 has AAATTTT but the rest have AAAATTT including a cosmid pcr | |||
| 17869 | 17809 | bases 21633 - 22471 are covered by a single clone | ||||
| 18415 | 18338 | |||||
| 18337 | 18260 | |||||
| 18259 | 18182 | single clone | ||||
| 18181 | 18104 | single clone | ||||
| 18103 | 18026 | single clone | ||||
| 18025 | 17948 | single clone | ||||
| 17947 | 17870 | single clone | ||||
| 18646 | 18571 | bases 21633 - 22471 are covered by a single clone | ||||
| 18570 | 18494 | |||||
| 18493 | 18416 | |||||
| 35101 | 35099 | |||||
| 35153 | 35152 | |||||
| 35156 | 35155 | |||||
| 35956 | 35898 | bases 4324 - 4382 in the inverted repeat are covered by a single clone | ||||
| Clone right end | 40279 | 40276 | F56A8 | |||
| 39249 | 39254 | Y39E4 | ||||
| Finished Right | 40279 | 40276 | F56A8 | |||
| Method | Genomic_canonical |
