WormBase Tree Display for Sequence: F57C7
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| F57C7 | DNA | F57C7 | 30149 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (13) | ||||
| CDS_child (334) | ||||||
| Transcript (20) | ||||||
| PCR_product (20) | ||||||
| Allele (432) | ||||||
| Oligo_set | Aff_F57C7.1A | 9306 | 10431 | |||
| Aff_F57C7.1B | 8890 | 9536 | ||||
| Aff_F57C7.2 | 14496 | 15917 | ||||
| Aff_F57C7.3 | 27827 | 25567 | ||||
| Aff_F57C7.4 | 21071 | 20339 | ||||
| Aff_F57C7.5 | 17686 | 16269 | ||||
| Feature_object (356) | ||||||
| Feature_data | F57C7:Polysome | 1 | 30149 | |||
| F57C7:TranscriptionallyActiveRegion | 1 | 30149 | ||||
| F57C7:ChIPSeqTF | 1 | 30149 | ||||
| F57C7:TRF | 1 | 30149 | ||||
| F57C7:Dust | 1 | 30149 | ||||
| F57C7:inverted | 1 | 30149 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | M79 | 30045 | ||||
| Overlap_left | F59F5 | |||||
| Clone_left_end | F57C7 | 1 | ||||
| M79 | 30045 | |||||
| Clone_right_end | F59F5 | 4737 | ||||
| DB_info | Database | EMBL | NDB_AC | Z69646 | ||
| NDB_SV | Z69646.2 | |||||
| DB_remark | [121025] Sequence correction: SNP 0 bases @ 26472 | |||||
| [121025] Sequence correction WBsf268355 : Insertion C1 bases from @ 30030 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | White S | ||||
| From_laboratory | HX | |||||
| Date_directory | 950925 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F57C7 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 77c5d99ac8f1fa4cbabfc7d137aa6ec8 | ||||
| Status | Finished | 25 Sep 1995 00:00:00 | ||||
| Submitted | 22 Feb 1996 00:00:00 | |||||
| Annotated | 21 Feb 1996 00:00:00 | |||||
| Map | Sequence-X | Ends | Left | 5682 | ||
| Right | 5705 | |||||
| Interpolated_map_position | X | 2.27996 | ||||
| Assembly_tags | annotation | 6484 | 6558 | 69 copies of TC shown. Restriction digest and PCR fragment agree, could be another 10 bases or so in the middle. | ||
| 6559 | 6626 | 69 copies of TC shown Restriction digest and PCR fragment agree could be another 10 bases or so in the middle | ||||
| 6726 | 6738 | ?2nd black tag | ||||
| 20502 | 20507 | Point mutation on both wh89c5.s1 and wh89c5.s1t | ||||
| Clone left end | 1 | 4 | ||||
| 30045 | 30048 | LHE M79 | ||||
| Finished Left | 1 | 4 | ||||
| Clone right end | 4734 | 4737 | RHE of F59F5 | |||
| Finished Right | 30145 | 30149 | ||||
| Method | Genomic_canonical |
