WormBase Tree Display for CDS: K08E3.4
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K08E3.4 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | K08E3 | ||
Structure | Source_exons | 1 | 139 | ||
189 | 301 | ||||
619 | 920 | ||||
980 | 1189 | ||||
1235 | 1833 | ||||
1881 | 2449 | ||||
DB_info | Database | TrEMBL | UniProtAcc | Q9XUT0 | |
UniProt | UniProtAcc | Q9XUT0 | |||
UniProt_GCRP | UniProtAcc | Q9XUT0 | |||
AlphaFold | entry | Q9XUT0 | |||
NCBI_protein | GI_number | GI:3878438 | |||
TREEFAM | TREEFAM_ID | TF318935 | |||
Protein_id | CHROMOSOME_III | CAB04592 | 1 | ||
DB_remark | DBN-1 protein; contains similarity to Pfam domains PF00241 (Cofilin/tropomyosin-type actin-binding protein), PF14604 (Variant SH3 domain); contains similarity to Interpro domains IPR002108 (Actin-depolymerising factor homology domain), IPR029006 (ADF-H/Gelsolin-like domain superfamily), IPR036028 (SH3-like domain superfamily), IPR001452 (SH3 domain) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00010664 | |||
Corresponding_transcript | K08E3.4.1 | ||||
Corresponding_protein | CE18868 | ||||
Corresponding_PCR_product | cenix:140-c5 | ||||
mv_K08E3.4 | |||||
sjj_K08E3.4 | |||||
smd_K08E3.4 | |||||
smd_K08E3.4_1 | |||||
Corresponding_oligo_set (13) | |||||
Matching_cDNA (81) | |||||
RNAi_result | WBRNAi00080543 | ||||
WBRNAi00117317 | |||||
WBRNAi00114664 | |||||
WBRNAi00117316 | |||||
WBRNAi00050284 | |||||
WBRNAi00016807 | |||||
WBRNAi00117315 | |||||
WBRNAi00077333 | |||||
WBRNAi00117318 | |||||
WBRNAi00034133 | |||||
Microarray_results (14) | |||||
RNASeq_FPKM (74) | |||||
Remark | Annotated using Pfam | ||||
SL1 trans-spliced, see EST yk132a12.5 | |||||
Associated_feature | WBsf126504 | ||||
Method | curated |