WormBase Tree Display for Sequence: M01E10

M01E10 DNA: M01E10 39974
  SMap: S_child: Gene_child: WBGene00023109 18300 18229
        WBGene00001063 33339 20320
        WBGene00023108 17850 17921
        WBGene00200615 34217 34068
        WBGene00202187 17922 17847
        WBGene00019709 39516 39111
      CDS_child: M01E10.1:wp17 1351 463
        M01E10.2:wp227 32333 20368
        M01E10.2a 33329 20368
        M01E10.2a:wp275 33329 20368
        M01E10.2b 30365 20368
        M01E10.3 39516 39111
        M01E10.3:wp275 39781 39204
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g129_x5_III_m 1273 1217
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g111_x5_III_m 28174 28034
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g93_x5_III_m 27027 26253
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g101_x5_III_m 6799 1291
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g104_x5_III_m 22085 22032
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g92_x5_III_m 21960 21907
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g89_x5_III_m 21883 21536
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g99_x5_III_m 928 463
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g57_x5_III_m 21401 20371
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g64_x5_III_m 28174 27974
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g45n11_x5_III_m 30365 29039
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g70_x5_III_m 27970 27776
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g60_x5_III_m 27664 27325
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g75_x5_III_m 25958 24479
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g76_x5_III_m 20464 20342
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g19e9k394_x5_III_m 27440 26968
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g19_x5_III_m 33329 30213
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g15_x5_III_m 30365 20371
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g15e7k394_x5_III_m 27440 26965
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g9n11_x5_III_m 6911 1217
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g22n11_x5_III_m 6911 1286
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g90_x5_III_m 1273 919
        RNASEQ_embryo_him-8_20dC_post-L1_g25n11e10k179_x5_III_m 27440 27181
        RNASEQ_embryo_him-8_20dC_post-L1_g25n11_x5_III_m 27440 27361
        RNASEQ_embryo_him-8_20dC_post-L1_g19n11_x5_III_m 33329 20371
        RNASEQ_embryo_him-8_20dC_post-L1_g19n11e10k179_x5_III_m 27431 27181
        RNASEQ_embryo_him-8_20dC_post-L1_g41_x5_III_m 25958 25953
        RNASEQ_embryo_him-8_20dC_post-L1_g50n11_x5_III_m 6911 1316
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g98_x5_III_m 25958 25623
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g127_x5_III_m 23569 23498
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g78_x5_III_m 6799 1300
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g116_x5_III_m 32327 31278
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g117_x5_III_m 27005 26222
        RNASEQ_L4_soma_JK1107_no_DNaseI_g126_x5_III_m 1273 1217
        RNASEQ_L4_soma_JK1107_no_DNaseI_g39n11_x5_III_m 6911 1292
        RNASEQ_L4_soma_JK1107_no_DNaseI_g138_x5_III_m 21946 21884
        RNASEQ_L4_soma_JK1107_no_DNaseI_g125_x5_III_m 22079 22011
        RNASEQ_L4_soma_JK1107_no_DNaseI_g88_x5_III_m 32287 31304
        RNASEQ_L4_soma_JK1107_no_DNaseI_g96_x5_III_m 811 463
        RNASEQ_early_embryo_g25_x5_III_m 33329 20371
        RNASEQ_early_embryo_g25s3k178_x5_III_m 30365 30213
        RNASEQ_early_embryo_g25e9k750_x5_III_m 27440 26959
        RNASEQ_early_embryo_g25s9k300_x5_III_m 25958 25953
        RNASEQ_early_embryo_g34_x5_III_m 27440 26968
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g10n11_x5_III_m 33329 20371
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g13n11e9k742_x5_III_m 27440 26959
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g10n11s10k271_x5_III_m 25958 25953
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g10n11e10k742_x5_III_m 27431 26959
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g24n11_x5_III_m 27431 26968
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g13n11_x5_III_m 27440 27361
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g22n11_x5_III_m 27440 26968
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g12n11s10k70_x5_III_m 25958 25953
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g12n11e10k733_x5_III_m 27440 26959
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g12n11_x5_III_m 33329 20371
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g32e8k463_x5_III_m 30431 26959
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g111_x5_III_m 32333 30584
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g32s8k318_x5_III_m 25958 20371
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g74_x5_III_m 877 8
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g35_x5_III_m 27440 25953
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g81_x5_III_m 1273 904
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g95_x5_III_m 825 531
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g144_x5_III_m 25958 24737
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g99_x5_III_m 22313 22257
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g141_x5_III_m 31304 30414
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g102_x5_III_m 32301 31309
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g145_x5_III_m 22217 22023
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g106_x5_III_m 28174 27980
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g143_x5_III_m 27664 27370
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g84_x5_III_m 28581 28480
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g71_x5_III_m 21907 21584
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g110_x5_III_m 26293 26207
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g89_x5_III_m 24436 23587
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g72_x5_III_m 22301 22017
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g129_x5_III_m 23322 23212
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g97_x5_III_m 27664 27367
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g95_x5_III_m 1217 890
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g56n11_x5_III_m 6911 1283
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g75_x5_III_m 21401 20434
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g74_x5_III_m 32298 31264
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g93_x5_III_m 29182 28244
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g111_x5_III_m 28151 28035
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g141_x5_III_m 25677 24855
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g48n11_x5_III_m 6911 6801
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g91_x5_III_m 27186 26211
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g129_x5_III_m 22280 22161
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g115_x5_III_m 885 537
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g85_x5_III_m 22043 21560
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g50n11_x5_III_m 6911 1238
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g86_x5_III_m 1273 874
        M01E10.gc1 1351 256
        M01E10.gc2 33329 20368
        M01E10.gc3 39625 38383
        ContigIII.elegans.jigsaw.349.mRNA349 39525 39057
        ContigIII.elegans.jigsaw.348.mRNA348 32333 20181
        AG1201_M01E10.2.T5 30365 20368
        AG1201_M01E10.2.T3 33329 20368
        AG1201_M01E10.2.T6 33329 20368
        AG1201_M01E10.2.T7 33329 20368
        AG1201_RIT3M.1253.T1 20870 20733
        AG1201_M01E10.2.T2 33329 21315
        AG1201_M01E10.2.T1 33329 22158
        AG1201_M01E10.3.T1 39516 39207
      Transcript: M01E10.4 34217 34068
        M01E10.5 17922 17847
        M01E10.t1 17850 17921
        M01E10.t2 18300 18229
        M01E10.2a.1 33339 20320
        M01E10.2b.1 30365 20329
        M01E10.3.1 39516 39111
      PCR_product: TH:327D6 27660 28806
        cenix:327-d6 27659 28807
        mv_M01E10.2 20370 32332
        mv_M01E10.3 39206 39780
        mv_M01E10.a 39206 39780
        p_M01E10.2_93 32334 34333
        sjj_M01E10.1 203 1849
        sjj_M01E10.2 27659 28807
      Allele (962)
      Oligo_set: Aff_M01E10.2 22283 20368
        Aff_M01E10.3 39781 39204
        Aff_M01E10.1 1351 303
      Feature_object (136)
      Feature_data: M01E10:Polysome 1 39974
        M01E10:TranscriptionallyActiveRegion 1 39974
        M01E10:ChIPSeqTF 1 39974
        M01E10:TRF 1 39974
        M01E10:Dust 1 39974
        M01E10:inverted 1 39974
      Homol_data (19)
  Structure: From: Source: CHROMOSOME_III
    Overlap_right: Y39A3A 39775
    Overlap_left: Y39A3B
    Clone_left_end: M01E10 1
    Clone_right_end: M01E10 39974
  DB_info: Database: EMBL NDB_AC FO081638
        NDB_ID _AF099921
        NDB_SV FO081638.1
    Secondary_accession: AF099921
    DB_remark: The 5' clone is Y39A3B, 1375 bp overlap; the 3' clone is Y39A3A, 200 bp overlap. Actual start of this clone is at base position 1 of M01E10; actual end is at 39974 of M01E10.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Geisel C
      Kramer J
      Smith A
    From_laboratory: RW
    Date: 17 Dec 1997 00:00:00
    Date_directory
    Species: Caenorhabditis elegans
  Visible: Clone: M01E10
    Remark: M01E10.1 was replaced and extended by Y39A3B.5 when the neighboring clone was finished-990105-js
  Properties: Genomic_canonical
    Checksum: MD5: 9049604406531885867bb66448a8a199
    Status: Shotgun
      Finished
      Submitted: 17 Dec 1997 00:00:00
  Map: Sequence-III
  Interpolated_map_position: III -15.6616
  Method: Genomic_canonical