WormBase Tree Display for Sequence: M01E10
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| M01E10 | DNA | M01E10 | 39974 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00023109 | 18300 | 18229 | |
| WBGene00001063 | 33339 | 20320 | ||||
| WBGene00023108 | 17850 | 17921 | ||||
| WBGene00200615 | 34217 | 34068 | ||||
| WBGene00202187 | 17922 | 17847 | ||||
| WBGene00019709 | 39516 | 39111 | ||||
| CDS_child (109) | ||||||
| Transcript | M01E10.4 | 34217 | 34068 | |||
| M01E10.5 | 17922 | 17847 | ||||
| M01E10.t1 | 17850 | 17921 | ||||
| M01E10.t2 | 18300 | 18229 | ||||
| M01E10.2a.1 | 33339 | 20320 | ||||
| M01E10.2b.1 | 30365 | 20329 | ||||
| M01E10.3.1 | 39516 | 39111 | ||||
| PCR_product | TH:327D6 | 27660 | 28806 | |||
| cenix:327-d6 | 27659 | 28807 | ||||
| mv_M01E10.2 | 20370 | 32332 | ||||
| mv_M01E10.3 | 39206 | 39780 | ||||
| mv_M01E10.a | 39206 | 39780 | ||||
| p_M01E10.2_93 | 32334 | 34333 | ||||
| sjj_M01E10.1 | 203 | 1849 | ||||
| sjj_M01E10.2 | 27659 | 28807 | ||||
| Allele (962) | ||||||
| Oligo_set | Aff_M01E10.2 | 22283 | 20368 | |||
| Aff_M01E10.3 | 39781 | 39204 | ||||
| Aff_M01E10.1 | 1351 | 303 | ||||
| Feature_object | WBsf991443 | 3222 | 3372 | |||
| WBsf991444 | 8022 | 8172 | ||||
| WBsf991445 | 9962 | 10112 | ||||
| WBsf991446 | 16162 | 16312 | ||||
| WBsf991447 | 17462 | 17612 | ||||
| WBsf991448 | 21619 | 21752 | ||||
| WBsf991449 | 26782 | 26932 | ||||
| WBsf991450 | 30722 | 30872 | ||||
| WBsf991451 | 34122 | 34272 | ||||
| WBsf991452 | 36962 | 37112 | ||||
| WBsf1014349 | 3202 | 3352 | ||||
| WBsf1014350 | 8022 | 8172 | ||||
| WBsf1014351 | 16142 | 16292 | ||||
| WBsf1014352 | 17422 | 17572 | ||||
| WBsf1014353 | 26782 | 26932 | ||||
| WBsf1014354 | 30722 | 30872 | ||||
| WBsf019700 | 6922 | 6921 | ||||
| WBsf073060 | 20261 | 20261 | ||||
| WBsf074291 | 29037 | 29037 | ||||
| WBsf074883 | 1283 | 1283 | ||||
| WBsf075319 | 1300 | 1300 | ||||
| WBsf076370 | 1313 | 1313 | ||||
| WBsf076371 | 20280 | 20280 | ||||
| WBsf078794 | 20275 | 20275 | ||||
| WBsf125980 | 30432 | 30431 | ||||
| WBsf161324 | 33338 | 33337 | ||||
| WBsf161828 | 29037 | 29037 | ||||
| WBsf163037 | 20261 | 20261 | ||||
| WBsf163038 | 26626 | 26626 | ||||
| WBsf163540 | 1300 | 1300 | ||||
| WBsf164298 | 1283 | 1283 | ||||
| WBsf168060 | 1235 | 1235 | ||||
| WBsf168806 | 20275 | 20275 | ||||
| WBsf168807 | 26965 | 26965 | ||||
| WBsf170322 | 1313 | 1313 | ||||
| WBsf170323 | 20280 | 20280 | ||||
| WBsf170324 | 27180 | 27180 | ||||
| WBsf226260 | 20367 | 20158 | ||||
| WBsf245643 | 20157 | 20156 | ||||
| WBsf615193 | 20174 | 20173 | ||||
| WBsf617112 | 20185 | 20184 | ||||
| WBsf899018 | 33140 | 33140 | ||||
| WBsf957192 | 1365 | 1364 | ||||
| WBsf957193 | 6312 | 6313 | ||||
| WBsf957195 | 15859 | 15860 | ||||
| WBsf957196 | 20467 | 20466 | ||||
| WBsf957197 | 31359 | 31358 | ||||
| WBsf957198 | 31845 | 31846 | ||||
| WBsf392083 | 38837 | 39148 | ||||
| WBsf392348 | 17744 | 17972 | ||||
| WBsf395776 | 33514 | 33756 | ||||
| WBsf397062 | 17645 | 18396 | ||||
| WBsf397920 | 38917 | 39040 | ||||
| WBsf399001 | 16537 | 16544 | ||||
| WBsf399387 | 17965 | 18167 | ||||
| WBsf399521 | 16649 | 16713 | ||||
| WBsf400014 | 6694 | 6840 | ||||
| WBsf400332 | 17925 | 18282 | ||||
| WBsf400418 | 6527 | 6847 | ||||
| WBsf401551 | 17624 | 18496 | ||||
| WBsf401787 | 33531 | 33796 | ||||
| WBsf401953 | 30735 | 31039 | ||||
| WBsf402478 | 38822 | 39100 | ||||
| WBsf403346 | 12794 | 13268 | ||||
| WBsf404722 | 17716 | 18359 | ||||
| WBsf405598 | 17716 | 18359 | ||||
| WBsf406575 | 2659 | 2663 | ||||
| WBsf407282 | 17765 | 17964 | ||||
| WBsf408208 | 17744 | 18354 | ||||
| WBsf408697 | 38790 | 39155 | ||||
| WBsf409156 | 17735 | 18406 | ||||
| WBsf409329 | 35238 | 35507 | ||||
| WBsf409354 | 35879 | 36186 | ||||
| WBsf411333 | 38814 | 39125 | ||||
| WBsf411549 | 35863 | 36130 | ||||
| WBsf411741 | 12881 | 13191 | ||||
| WBsf413422 | 17699 | 18404 | ||||
| WBsf414008 | 17755 | 18491 | ||||
| WBsf414484 | 37819 | 38283 | ||||
| WBsf415905 | 17682 | 17959 | ||||
| WBsf421607 | 30150 | 30316 | ||||
| WBsf421725 | 17299 | 17306 | ||||
| WBsf423316 | 16504 | 16625 | ||||
| WBsf424442 | 38795 | 39167 | ||||
| WBsf424689 | 35245 | 35513 | ||||
| WBsf426204 | 17754 | 17939 | ||||
| WBsf426615 | 39496 | 39537 | ||||
| WBsf426968 | 18356 | 18377 | ||||
| WBsf427636 | 17633 | 18007 | ||||
| WBsf427975 | 15839 | 15907 | ||||
| WBsf428767 | 17671 | 17961 | ||||
| WBsf428986 | 18219 | 18366 | ||||
| WBsf429317 | 17716 | 18485 | ||||
| WBsf429331 | 22366 | 23093 | ||||
| WBsf429688 | 16133 | 16787 | ||||
| WBsf430496 | 17757 | 17938 | ||||
| WBsf434914 | 17744 | 18404 | ||||
| WBsf434924 | 16158 | 16914 | ||||
| WBsf435325 | 17227 | 17337 | ||||
| WBsf436552 | 16127 | 16888 | ||||
| WBsf436798 | 14431 | 14627 | ||||
| WBsf436911 | 18152 | 18391 | ||||
| WBsf437355 | 36180 | 36184 | ||||
| WBsf437363 | 17786 | 17932 | ||||
| WBsf437400 | 31683 | 31828 | ||||
| WBsf439228 | 17840 | 17861 | ||||
| WBsf439544 | 17909 | 17935 | ||||
| WBsf440145 | 38896 | 38911 | ||||
| WBsf440166 | 22177 | 22260 | ||||
| WBsf440488 | 17689 | 18535 | ||||
| WBsf441261 | 16582 | 16930 | ||||
| WBsf441925 | 12849 | 12935 | ||||
| WBsf442028 | 36012 | 36065 | ||||
| WBsf442183 | 16138 | 16304 | ||||
| WBsf442409 | 17259 | 17278 | ||||
| WBsf442707 | 24939 | 25041 | ||||
| WBsf666591 | 21568 | 21562 | ||||
| WBsf678844 | 2740 | 2742 | ||||
| WBsf678845 | 11014 | 11014 | ||||
| WBsf678846 | 13048 | 13090 | ||||
| WBsf678847 | 18520 | 18542 | ||||
| WBsf678848 | 26260 | 26263 | ||||
| WBsf678849 | 33681 | 33734 | ||||
| WBsf678850 | 37152 | 37170 | ||||
| WBsf678851 | 38988 | 39009 | ||||
| WBsf700057 | 34463 | 34439 | ||||
| WBsf700432 | 10878 | 10859 | ||||
| WBsf700433 | 12990 | 12975 | ||||
| WBsf700434 | 16316 | 16316 | ||||
| WBsf700435 | 16731 | 16730 | ||||
| WBsf700436 | 17291 | 17291 | ||||
| WBsf700437 | 35861 | 35831 | ||||
| WBsf715785 | 18304 | 18301 | ||||
| WBsf717867 | 12881 | 13191 | ||||
| WBsf717868 | 38814 | 39125 | ||||
| WBsf261832 | 17504 | 17555 | ||||
| Feature_data | M01E10:Polysome | 1 | 39974 | |||
| M01E10:TranscriptionallyActiveRegion | 1 | 39974 | ||||
| M01E10:ChIPSeqTF | 1 | 39974 | ||||
| M01E10:TRF | 1 | 39974 | ||||
| M01E10:Dust | 1 | 39974 | ||||
| M01E10:inverted | 1 | 39974 | ||||
| Homol_data (19) | ||||||
| Structure | From | Source | CHROMOSOME_III | |||
| Overlap_right | Y39A3A | 39775 | ||||
| Overlap_left | Y39A3B | |||||
| Clone_left_end | M01E10 | 1 | ||||
| Clone_right_end | M01E10 | 39974 | ||||
| DB_info | Database | EMBL | NDB_AC | FO081638 | ||
| NDB_ID | _AF099921 | |||||
| NDB_SV | FO081638.1 | |||||
| Secondary_accession | AF099921 | |||||
| DB_remark | The 5' clone is Y39A3B, 1375 bp overlap; the 3' clone is Y39A3A, 200 bp overlap. Actual start of this clone is at base position 1 of M01E10; actual end is at 39974 of M01E10. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Geisel C | ||||
| Kramer J | ||||||
| Smith A | ||||||
| From_laboratory | RW | |||||
| Date | 17 Dec 1997 00:00:00 | |||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | M01E10 | ||||
| Remark | M01E10.1 was replaced and extended by Y39A3B.5 when the neighboring clone was finished-990105-js | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 9049604406531885867bb66448a8a199 | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 17 Dec 1997 00:00:00 | |||||
| Map | Sequence-III | |||||
| Interpolated_map_position | III | -15.6616 | ||||
| Method | Genomic_canonical |
