WormBase Tree Display for Sequence: M57

M57 DNA: M57 23761
  SMap: S_child: Gene_child: WBGene00019778 8976 14095
        WBGene00197241 6524 6434
        WBGene00019777 14089 20687
        WBGene00220034 3580 3649
        WBGene00023115 6441 6513
      CDS_child: M57.1 15274 20626
        M57.2a 8981 13889
        M57.2b 13764 13889
        Y37E11C.1c 1306 7194
        Y37E11C.1c:wp273 6012 7194
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g139_x8_IV_p 19284 19458
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g82_x8_IV_p 20201 20578
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g10n11_x8_IV_p 8981 13886
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g69n11_x8_IV_p 15274 19259
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g85_x8_IV_p 20207 20578
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g115_x8_IV_p 8981 13886
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g83n11_x8_IV_p 15274 17061
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g110_x8_IV_p 19281 19452
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g96_x8_IV_p 17266 17373
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g98_x8_IV_p 17383 18003
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g100_x8_IV_p 19215 19262
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g141_x8_IV_p 15533 17232
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g118_x8_IV_p 18043 19250
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g17n11_x8_IV_p 8981 13886
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g97_x8_IV_p 19275 19368
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g91_x8_IV_p 17359 17940
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g73_x8_IV_p 20204 20581
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g58_x8_IV_p 9777 9857
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g82_x8_IV_p 3241 3362
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g23_x8_IV_p 5565 11450
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g38n11_x8_IV_p 2767 2886
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g72_x8_IV_p 4028 5369
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g62_x8_IV_p 20243 20590
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g70_x8_IV_p 13764 13877
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g48_x8_IV_p 10098 12223
        RNASEQ_embryo_him-8_20dC_post-L1_g115_x8_IV_p 17443 17991
        RNASEQ_embryo_him-8_20dC_post-L1_g57_x8_IV_p 20201 20578
        RNASEQ_embryo_him-8_20dC_post-L1_g10n11_x8_IV_p 8981 13886
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g64_x8_IV_p 1306 7191
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g56n11_x8_IV_p 2767 4376
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g117_x8_IV_p 8981 13886
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g93_x8_IV_p 20198 20587
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g168_x8_IV_p 19284 19458
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g71_x8_IV_p 15274 19268
        RNASEQ_L4_soma_JK1107_no_DNaseI_g56_x8_IV_p 109 7191
        RNASEQ_L4_soma_JK1107_no_DNaseI_g114_x8_IV_p 15548 17139
        RNASEQ_L4_soma_JK1107_no_DNaseI_g123_x8_IV_p 17398 17994
        RNASEQ_L4_soma_JK1107_no_DNaseI_g84_x8_IV_p 15340 15481
        RNASEQ_L4_soma_JK1107_no_DNaseI_g18n11_x8_IV_p 8981 13886
        RNASEQ_L4_soma_JK1107_no_DNaseI_g98_x8_IV_p 20258 20590
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g78_x8_IV_p 17266 19265
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g26n11_x8_IV_p 8981 13886
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g102_x8_IV_p 19278 19458
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g77_x8_IV_p 15274 17196
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g48_x8_IV_p 20210 20623
        RNASEQ_early_embryo_g55_x8_IV_p 19275 19458
        RNASEQ_early_embryo_g35_x8_IV_p 15274 19268
        RNASEQ_early_embryo_g43_x8_IV_p 20204 20623
        RNASEQ_early_embryo_g11n11_x8_IV_p 8981 13886
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g140_x8_IV_p 8981 13886
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g72_x8_IV_p 19275 19458
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g57_x8_IV_p 20201 20623
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g38_x8_IV_p 15274 19268
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g22n11_x8_IV_p 8981 13886
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g74n11_x8_IV_p 15274 19470
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g96_x8_IV_p 20195 20623
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g139_x8_IV_p 8374 9027
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g7n11_x8_IV_p 2767 11450
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g141_x8_IV_p 19302 19455
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g107_x8_IV_p 20201 20311
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g82_x8_IV_p 15274 17052
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g51_x8_IV_p 9777 13886
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g94_x8_IV_p 17266 19256
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g10n11_x8_IV_p 8981 13886
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g162_x8_IV_p 19302 19440
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g65_x8_IV_p 15274 19265
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g85_x8_IV_p 20207 20623
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g71_x8_IV_p 5043 7191
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g45_x8_IV_p 5565 9251
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g117_x8_IV_p 8981 13886
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g107_x8_IV_p 17266 17430
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g91_x8_IV_p 19275 19377
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g119_x8_IV_p 20282 20590
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g76_x8_IV_p 15274 15574
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g50n11_x8_IV_p 6012 6389
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g23n11_x8_IV_p 2767 11450
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g86_x8_IV_p 15274 17148
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g103_x8_IV_p 17266 18144
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g126_x8_IV_p 20213 20578
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g13n11_x8_IV_p 8981 13886
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g92_x8_IV_p 20234 20587
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g76n11_x8_IV_p 8981 13886
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g110_x8_IV_p 19275 19458
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g71_x8_IV_p 18043 19268
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g87_x8_IV_p 17266 17442
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g72_x8_IV_p 15274 17235
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g88_x8_IV_p 5367 7191
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g19n11_x8_IV_p 2767 3246
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g89_x8_IV_p 3253 8987
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g67n11_x8_IV_p 4028 8990
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g107_x8_IV_p 20243 20578
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g65n11_x8_IV_p 15274 15574
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g84_x8_IV_p 17356 19268
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g76n11_x8_IV_p 8981 13886
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g127_x8_IV_p 19281 19455
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g85_x8_IV_p 20198 20620
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g70n11_x8_IV_p 15274 15499
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g99_x8_IV_p 18043 19271
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g134_x8_IV_p 17266 17391
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g106_x8_IV_p 17395 17994
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g117_x8_IV_p 19275 19458
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g12n11_x8_IV_p 8981 13886
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g60_x8_IV_p 1306 5483
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g53_x8_IV_p 3241 5504
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g77_x8_IV_p 10271 11450
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g57_x8_IV_p 2767 3141
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g44n11_x8_IV_p 15274 19265
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g115_x8_IV_p 19281 19449
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g8n11_x8_IV_p 8981 13886
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g82_x8_IV_p 20234 20314
        M57.gc1 934 7194
        M57.gc2 8981 14261
        M57.gc3 15274 20626
        Y37E11C.gc3 8981 10552
        ContigIV.elegans.jigsaw.532.mRNA532 8444 14176
        ContigIV.elegans.jigsaw.533.mRNA533 15244 20691
        AG1201_M57.2.T10 6012 7194
        AG1201_RIT4M.1140.T1 8074 7811
        AG1201_M57.2.T3 8981 13889
        AG1201_RIT4M.1831.T1 9766 9677
        AG1201_M57.2.T1 15274 20626
      Transcript: M57.3 3580 3649
        M57.t1 6441 6513
        M57.1.1 15263 20685
        M57.1.2 14089 20685
        M57.1.3 14135 20685
        M57.1.4 14346 20687
        M57.2a.1 8976 14095
        M57.2b.1 13764 13889
        Y37E11C.1c.1 1306 7194
      PCR_product: cenix:151-a7 5005 6490
        cenix:186-g7 19770 19919
        cenix:88-g6 11925 13455
        mv_CAA78522 1307 7192
        mv_M57.1 15275 20624
        mv_M57.2 8982 13886
        sjj_M57.1 18885 20042
        sjj_M57.2 9034 10153
        sjj_Y37E11C.1 4502 5645
      Allele (448)
      Oligo_set: Aff_M57.1 19731 20625
        Aff_M57.2 12196 13888
      Feature_object (260)
      Feature_data: M57:Polysome 1 23761
        M57:TranscriptionallyActiveRegion 1 23761
        M57:ChIPSeqTF 1 23761
        M57:TRF 1 23761
        M57:Dust 1 23761
        M57:inverted 1 23761
      Homol_data (19)
  Structure: From: Source: CHROMOSOME_IV
    Overlap_right: B0212 21762
    Overlap_left: Y37E11C
    Clone_left_end: M57 1
      B0212 22562
  DB_info: Database: EMBL NDB_AC FO080120
        NDB_ID _AF100664
        NDB_SV FO080120.2
    Secondary_accession: AF100664
    DB_remark: The 5' clone is Y37E11C, 11700 bp overlap; the 3' clone is B0212, 2000 bp overlap. Actual start of this clone is at base position 1 of M57; actual end is at 19964 of B0212.
      [121025] Sequence correction: SNP 0 bases @ 7528
      [121025] Sequence correction WBsf267976 : Insertion G1 bases from @ 5762
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Latreille P
      Kramer J
      Twyman B
    From_laboratory: RW
    Date: 25 Mar 1998 00:00:00
    Date_directory
    Species: Caenorhabditis elegans
  Visible: Clone: M57
  Properties: Genomic_canonical
    Checksum: MD5: 56e7174c658326168daf53c28fc9fc8c
    Status: Finished
      Submitted: 25 Mar 1998 00:00:00
  Map: Sequence-IV
  Interpolated_map_position: IV -3.27805
  Method: Genomic_canonical