WormBase Tree Display for CDS: OVOC1992
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OVOC1992 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_91 | |||
Structure | Source_exons | 1 | 157 | |||
794 | 995 | |||||
1402 | 1539 | |||||
1750 | 1867 | |||||
2367 | 2495 | |||||
2582 | 2694 | |||||
2823 | 2921 | |||||
3237 | 3315 | |||||
3407 | 3463 | |||||
3898 | 4022 | |||||
4199 | 4262 | |||||
DB_info | DB_remark | OVO-UNC-59 protein; contains similarity to Pfam domain PF00735 (Septin); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR016491 (Septin), IPR030379 (Septin-type guanine nucleotide-binding (G) domain) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00238801 | ||||
Corresponding_transcript | OVOC1992.1 | |||||
Corresponding_protein | OVP01175 | |||||
Matching_cDNA | ovolvulus_GG540|c58_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 31.6649 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 19.6687 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
41.1923 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
42.4077 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 39.918 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
51.8934 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Method | curated |