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WormBase Tree Display for CDS: OVOC2280

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Name Class

OVOC2280SMapS_parentSequenceOVOC_OM1b_113
StructureSource_exons176
765868
11451217
13011383
23182521
29603094
33653483
37563831
DB_infoDB_remarkcontains similarity to Pfam domain PF01145 (SPFH domain / Band 7 family); contains similarity to Interpro domains IPR001972 (Stomatin/HflK family), IPR036013 (Band 7/SPFH domain superfamily), IPR001107 (Band 7 domain)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00239089
Corresponding_transcriptOVOC2280.1
Corresponding_proteinOVP06936
RNASeq_FPKMWBls:0000104 (14)
WBls:00001078.21796From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001082.98115From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
5.89921From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
9.20128From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:000066429.0954From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
61.8522From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated