WormBase Tree Display for CDS: OVOC3470
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| OVOC3470 | Evidence | Curator_confirmed | WBPerson2062 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | OVOC_OM1b_199 | |||
| Structure | Source_exons (22) | |||||
| DB_info | DB_remark | contains similarity to Pfam domains PF00622 (SPRY domain), PF02037 (SAP domain), PF13671 (AAA domain); contains similarity to Interpro domains IPR013320 (Concanavalin A-like lectin/glucanase domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR003877 (SPRY domain), IPR036361 (SAP domain superfamily), IPR003034 (SAP domain) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00240279 | ||||
| Corresponding_transcript | OVOC3470.1 | |||||
| Corresponding_protein | OVP03325 | |||||
| Brief_identification | Putative e1b-55kD-associated protein | Person_evidence | WBPerson2973 | |||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 6.2772 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 23.2969 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
| 28.1246 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| 3.03257 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| WBls:0000664 | 24.9142 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
| 26.8752 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
| Method | curated |
