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WormBase Tree Display for CDS: OVOC3486

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Name Class

OVOC3486EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_199
StructureSource_exons1149
487723
10621167
14021596
19322128
22162354
DB_infoDB_remarkcontains similarity to Pfam domain PF10292 (Serpentine type 7TM GPCR receptor class ab chemoreceptor); contains similarity to Interpro domain IPR019408 (7TM GPCR, serpentine receptor class ab (Srab))
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00240295
Corresponding_transcriptOVOC3486.1
OVOC3486.2
Corresponding_proteinOVP13716
Matching_cDNAovolvulus_GG570|c189_g1_i4Inferred_automaticallytranscript_builder.pl
ovolvulus_GG570|c189_g1_i6Inferred_automaticallytranscript_builder.pl
ovolvulus_GG570|c189_g1_i17Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001073.49468From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001081.70534From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
2.42801From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
3.73865From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006641.2157From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
1.24621From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140422 es9] Splice sites of OVOC3486 gene model corrected using RNA-Seq and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated