WormBase Tree Display for CDS: OVOC3801
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OVOC3801 | SMap | S_parent | Sequence | OVOC_OM2_1 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 54 | ||
556 | 767 | ||||
1509 | 1744 | ||||
1872 | 1927 | ||||
2814 | 2887 | ||||
2972 | 3040 | ||||
4157 | 4238 | ||||
4963 | 5080 | ||||
7497 | 7660 | ||||
8490 | 8625 | ||||
8820 | 8958 | ||||
9056 | 9147 | ||||
9958 | 10090 | ||||
10595 | 10683 | ||||
10967 | 11036 | ||||
11647 | 11662 | ||||
DB_info | DB_remark | OVO-UNC-3 protein; contains similarity to Pfam domains PF01833 (IPT/TIG domain), PF16422 (Transcription factor COE1 DNA-binding domain), PF16423 (Transcription factor COE1 helix-loop-helix domain); contains similarity to Interpro domains IPR014756 (Immunoglobulin E-set), IPR002909 (IPT domain), IPR038173 (Transcription factor COE, DNA-binding domain superfamily), IPR032200 (Transcription factor COE, DNA-binding domain), IPR013783 (Immunoglobulin-like fold), IPR032201 (Transcription factor COE, helix-loop-helix domain), IPR036638 (Helix-loop-helix DNA-binding domain superfamily), IPR003523 (Transcription factor COE) | |||
Origin | From_laboratory | MGM | |||
Species | Onchocerca volvulus | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | WBGene00240610 | |||
Corresponding_transcript | OVOC3801.1 | ||||
Corresponding_protein | OVP11689 | ||||
Brief_identification | Transcription factor homolog | Person_evidence | WBPerson2973 | ||
RNASeq_FPKM (4) | |||||
Method | curated |