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WormBase Tree Display for CDS: OVOC3902

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Name Class

OVOC3902SMapS_parentSequenceOVOC_OM2_1
StructureSource_exons (39)
DB_infoDB_remarkOVO-CCA-1 protein; contains similarity to Pfam domain PF00520 (Ion transport protein); contains similarity to Interpro domains IPR005445 (Voltage-dependent calcium channel, T-type, alpha-1 subunit), IPR005821 (Ion transport domain), IPR027359 (Voltage-dependent channel domain superfamily), IPR002077 (Voltage-dependent calcium channel, alpha-1 subunit)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00240711
Corresponding_transcriptOVOC3902.1
Corresponding_proteinOVP00964
RNASeq_FPKMWBls:0000104 (15)
WBls:00001075.52001From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010814.5574From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
23.2909From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
8.2732From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066412.6137From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
15.5639From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated